| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4314 |
|---|
| Symbol | |
|---|
| ID | 9248189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 5146554 |
|---|
| End bp | 5147957 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_003682209 |
|---|
| Protein GI | 297563235 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.951692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCTGC GCTTCTACGA CACCAGTGCC CGACAGGTCC GCGAGTTCGT CCCGCTGCGC
GAGGGGGCCG CCTCCCTGTA CCTGTGTGGT GCCACGGTGC AGGCACCCCC GCACATCGGG
CACATCCGCT CCGGGGTGAA CTTCGACATC CTGCGCCGCT GGTTGACGCA CCTGGGGTAC
GACGTCACCT TCTGCCGCAA CGTCACCGAC ATCGACGACA AGATCATCCG GGTCGCGTCG
GACGAGGGCG TGCCGTGGTG GCAGGTCAGC GAGCGCAACC AGCGCGCCTT CACGCACGCG
TACGAGATCC TGGGCTGCCT GCCGCCCACC GTCGAGCCGC GGGCCACCGG GCACGTGCCC
GAGATGATCG ACCTCATGCA CCGCCTCATC GACGCGGGCC ACGCCTACGC CGCCTCCGAC
GGCTCCGGCG ACGTCTACTT CGACGTGCGC TCCTACCCGC CCTACGGGGG CCTGTCCAAC
CAGCGCCTGG ACCAGGTCGT GGAGTCGGCC GACTGCGACG CGGACCGCGA CAAGCGCGAC
CCCCGCGACT TCGCCCTGTG GAAGGGCGCC AAGCCGGGCG AGCCCAGCTG GCACACGCCG
TGGGGGCGCG GACGCCCCGG CTGGCACCTG GAGTGCTCGG CCATGGCCAC CAAGTACCTG
GGCCCCAGCT TCGACATCCA CGGCGGCGGC CTGGACCTGG TCTTCCCGCA CCACGAGAAC
GAGCTCGCCC AGTCCCGCGC GGCCGGGGAC GGCTTCGCCC AGTACTGGCT GCACAACGGG
CTCCTCGTCG TCGGCGGCGA GAAGATGAGC AAGTCGCTGG GCAACTCCCT GCTCATCCCG
CAGATGGTGC GCAAGGTGCG CCCGGTCGAG CTGCGGTACT ACCTGGGCCA GGTGCACTAC
CGCTCGGTCA TCGACTACTC CGACGCCGCC CTCCAGGAGG CGGCCACCGC CTACCAGCGC
ATCGAGGGCT TCCTCACCCG CGCCGTCGAG GTGCTGGGCG AGGTCGCCCC GGCAGCGGAC
GTCCCCGCGG AGTTCGCGTC CGCGCTCAAC GACGACCTCG GGGTCTCCCA GGCGCTCGCC
GTCGTGCACG GCCACGTCCG CGAGGGCAAC ACGGCGCTGG CGGCGGGCGG CAAGGAGCAG
GCCGCCGAGA TCGCCGGTGA GCTGCGCACC ATGCTCGGCG TCCTGGGCCT GGACCCGCTC
GGGGAGCAGT GGGCCACCGG CGGGGACCAG GGGCTGCGCG AGGTCGTGGA CGCCCTGGTG
GCGGTCGCCC TGGAGCAGCG CCAGGCCGCC CGCGGCCGCA AGGACTACGC GGCGGCCGAC
GCGATCCGCG ACCAGCTCGC GGGGGCGGGC GTCGTGGTCG AGGACACCCC CGAGGGCCCG
CGCTGGGACC TGCGCCGCGA CTGA
|
|---|
| Protein sequence | MSLRFYDTSA RQVREFVPLR EGAASLYLCG ATVQAPPHIG HIRSGVNFDI LRRWLTHLGY
DVTFCRNVTD IDDKIIRVAS DEGVPWWQVS ERNQRAFTHA YEILGCLPPT VEPRATGHVP
EMIDLMHRLI DAGHAYAASD GSGDVYFDVR SYPPYGGLSN QRLDQVVESA DCDADRDKRD
PRDFALWKGA KPGEPSWHTP WGRGRPGWHL ECSAMATKYL GPSFDIHGGG LDLVFPHHEN
ELAQSRAAGD GFAQYWLHNG LLVVGGEKMS KSLGNSLLIP QMVRKVRPVE LRYYLGQVHY
RSVIDYSDAA LQEAATAYQR IEGFLTRAVE VLGEVAPAAD VPAEFASALN DDLGVSQALA
VVHGHVREGN TALAAGGKEQ AAEIAGELRT MLGVLGLDPL GEQWATGGDQ GLREVVDALV
AVALEQRQAA RGRKDYAAAD AIRDQLAGAG VVVEDTPEGP RWDLRRD
|
|---|
| |