| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4293 |
|---|
| Symbol | |
|---|
| ID | 9248167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 5108835 |
|---|
| End bp | 5110007 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF418 |
|---|
| Protein accession | YP_003682188 |
|---|
| Protein GI | 297563214 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCATA CGTCCACCCC GGAGCCCCGC ACGGCTCCGG TCCCCGACCA ACCGCTCCCG
CTCGGCCGCC GCTCCCTGGC CCCGGACCTG GCCCGCGGCG TCATGCTGCT GTTCATCGCG
CTCGCCCACA CGCACCTGTT CACCGTGTTC ATCGGCGGCC CGCAGGGCGC TCCCAACCCC
GCCGACCAGC TCACCACCGC GGCCACGGTC ATGTTCGTCG ACCTGCGCAG CTACCCCATG
TTCGCTGCCC TGTTCGGGTA CGGCCTGGCT CAGATCCACC GCCGCCGCGG CCAACAGGGG
CAGGACTGGC CCCGGACCCG CGGCCTGCTG CGCCGACGCG GCCTGTGGAT GGTCGCCTTC
GGTCTGGCGC ACACGGTGCT GCTCTTCCCC GCCGACATCC TGGCCGTCTA CGGCCTGGTG
ACGCTGGCCC TGGTGGGCGT CCTGCGGTTG CGCGACCGGA CCCTGGTGAT CCTGGCGGCG
GCCTGGCTGC CCGTGGCCGC GGCCGTGCAC GCCCTGATCG CCGCCGAGGA CACCGTGACA
GGACAGGGCA TGCCGCTGAT GCCCGACGGG TTCGCGGACG AACTCCTCTT CCGGGTGACC
CTGTTCTCGG TCCTGGCCGT GGTGATGTTC GCCAGCACGC TCGTCCCGTT CCTGATCGGT
GTCCTGGCGG CCCGGCACCG GATCCTGGAG CGGCCCCACG AGCACCTGCG ACTGCTGCGC
GCCACCGCGT TCGCGGGCAT CCCCCTGGCG GCGCTGGGCG GCCTCCCCCT GGCCCTGGAC
AAGGCGGAGG TGTGGACCGG CGCCACGACC GGGGACCTCG TCGCCGCCAC GGCACTGCAC
CAGGTGAGCG GCTACGCGGG CGCGCTGGGC TACGCCGCGC TCATCGCCCT GGTCGCGGTC
CGCCTCACGG GCCGAGAGGG GCCGGTGACC GACGCCCTGG CCGCGCTCGG ACAGCGCTCC
ATGACCTTCT ACCTGGCCCA GTCCATGGCC TGGGCCGTGC TGTTCTCCTC CTACACGCTC
GACCTGCACA TGACGTCGCC CGCCGTCGGC GCGGGCGTCG CGGTGGCCGT GTGGCTGGCC
ACGGTGCTGC TCGCCGACCT CATGCGCCGC CGGGGCGTGC GCGGACCCGC CGAGGTGGTG
CTGCGCCGCC TCACCTACGG GCCGTCGCGC TGA
|
|---|
| Protein sequence | MSHTSTPEPR TAPVPDQPLP LGRRSLAPDL ARGVMLLFIA LAHTHLFTVF IGGPQGAPNP
ADQLTTAATV MFVDLRSYPM FAALFGYGLA QIHRRRGQQG QDWPRTRGLL RRRGLWMVAF
GLAHTVLLFP ADILAVYGLV TLALVGVLRL RDRTLVILAA AWLPVAAAVH ALIAAEDTVT
GQGMPLMPDG FADELLFRVT LFSVLAVVMF ASTLVPFLIG VLAARHRILE RPHEHLRLLR
ATAFAGIPLA ALGGLPLALD KAEVWTGATT GDLVAATALH QVSGYAGALG YAALIALVAV
RLTGREGPVT DALAALGQRS MTFYLAQSMA WAVLFSSYTL DLHMTSPAVG AGVAVAVWLA
TVLLADLMRR RGVRGPAEVV LRRLTYGPSR
|
|---|
| |