| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4240 |
|---|
| Symbol | |
|---|
| ID | 9248114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 5056229 |
|---|
| End bp | 5057392 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_003682137 |
|---|
| Protein GI | 297563163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.481849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.893444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACGC CTTCACCGCC TCCCAACCAA CAGCCCCAGG TCCTCGAGTT CTTCGCGGGG
ATCGGCTTGG CCAGAATCGG ACTCGAAGCA GCGGGTCTCA GGGTCTCGTG GTCCAACGAT
TACGAGACGA GCAAGAAGAA CATGTACGAA GGTCACTTTG GGACATCCAG CGACCACACA
TATGTGCTCC GCGATATTCG GAAAGTCTAC GCTGACCAGC TCCCGGCTGG CGCATCCGTG
GCATGGGCTT CATCACCTTG CACAGACCTG TCACTCGCAG GAGCCAGGGC CGGCCTGGCA
GGGGCAGAGT CAGGAACCTT CTGGGAATTC ATTAGAATCC TTAAAGATTT CAATGAATCA
CGCCCTCCTA TCGCCGTCCT TGAAAATGTT GTTGGACTAG CGACTTCACA TGCAGGCGAA
GATCTAGCTG CCGCAGTAAA GGCATTCAAT GAGCTCGGTT ACTCAGTCGA CGTCCTAGTG
ATCGACGCGC GCCGCTTCAT TCCACAGTCA CGACCGCGTC TTTTTCTTGT AGCCGCCCAA
AACCCTCCAA ATGGCCGCCC TCAGACAGAT TCCACACTAC GCCCCGACTT TCTTCAGCCA
GTCTTTGGGG ATCCAACACT CACAACGCAT AGGGCACATC TTCCTGAACC TCCGGCACTC
CTAACGTCCG GTTTTGGGAT GTGCGTCGAA GAGATGCCCT TGAATGACGA GCGATGGTGG
GATGAAGAAC GAACAGAGGC ATTCATGTCC TCGCTATCAC CCACACAATA CCAGCGCGTG
ATGCAGATGC ATTCCTCACC GGGCGTTAAG TACCGAACAG CATATAGGCG AACTCGTAAG
GGAATCCCCG TATGGGAGGT TCGCCCTGAT GACGTATCGG GGTGCTTGCG AACTGCACGC
GGTGGCTCTT CCAAGCAAGC TGTTCTAAGG GTCGATAACT CATCGCTTCA TGTCAGGTGG
ATGACCCCTC GAGAATATGC CCGCTTGATG GGAGCAGGCG AGTATAAGCT TGACGGGATC
CGAGCCAATA AGGCATTGTT CGGCTTCGGC GACGCTGTCG CCGCACCTGT CGTGCAGTGG
CTAAGCGAGA AATATCTTTT GCCTCTCCTT CGAGAAGAAA ATTTTACCGA GCCCGAGATG
ATGGAGATCC CTCTTGGCCA GTAG
|
|---|
| Protein sequence | MFTPSPPPNQ QPQVLEFFAG IGLARIGLEA AGLRVSWSND YETSKKNMYE GHFGTSSDHT
YVLRDIRKVY ADQLPAGASV AWASSPCTDL SLAGARAGLA GAESGTFWEF IRILKDFNES
RPPIAVLENV VGLATSHAGE DLAAAVKAFN ELGYSVDVLV IDARRFIPQS RPRLFLVAAQ
NPPNGRPQTD STLRPDFLQP VFGDPTLTTH RAHLPEPPAL LTSGFGMCVE EMPLNDERWW
DEERTEAFMS SLSPTQYQRV MQMHSSPGVK YRTAYRRTRK GIPVWEVRPD DVSGCLRTAR
GGSSKQAVLR VDNSSLHVRW MTPREYARLM GAGEYKLDGI RANKALFGFG DAVAAPVVQW
LSEKYLLPLL REENFTEPEM MEIPLGQ
|
|---|
| |