| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4225 |
|---|
| Symbol | |
|---|
| ID | 9248099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 5043487 |
|---|
| End bp | 5044248 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003682123 |
|---|
| Protein GI | 297563149 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.320526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCGG AAGAGCGCCA GAAGGCGATC CTCGAACGCG CCCGGCGGGA CGGCCGGGTC
GACGTGACGG GACTCGCCGC GGAGTTCGAC GTCACGTACG AGAACATCAG GCGCGACCTC
ACGGCACTCG AACGCCACGG GGTCCTGCGC AGGGTCCACG GTGGCGCGAT CCCCGTCGAG
CGGCTGGGCT TCGAGCCCGC CCTCAATGTG CGCGACTCCG TCATGACGCA GGAGAAGGAG
CGCATCGCCA AGGCGGCTCT CGCCGAACTC CCGGAGGAGG GCGCCATCCT GCTCGACGCC
GGGTCCACCA CCGGACGCCT CGCCGAGCAG TTGCCCGCCG ACCGCGAACT CACCGTCGTC
ACCAACTCCC TGTCCATCGC CCTCACGCTC GCCCCGCGTA CCCACATCAA CCTCATGCTG
CTCGGCGGGC GCCTGCGCAC CCGCACCCAG GCCACCGTCG ACGCCTGGGC GCTGCGCTCC
CTCGCCGAGT CCTACGTCGA CGTCGCCTTC ATGGCGGCGA ACGGGATCTC CACCGAACGC
GGGCTCACCA CACCCGATCC CGCGGAGGCG GAGGTCAAGC GGACCATGAT CGCCTCGGCC
CGCCGCTGCG TCCTGCTCGC CGACCACACC AAGGTCGGCA ACGACCACTT CGCCCGTTTC
GCGGCGGTCG AGGACCTCGA TCTGGTCATC ACCGACACCG GTCTCGCCAG CGGTCTCGCC
GACGAACTGG AGGCCGCCGG ACCCCGAGTC CAGGTGGTCT GA
|
|---|
| Protein sequence | MYAEERQKAI LERARRDGRV DVTGLAAEFD VTYENIRRDL TALERHGVLR RVHGGAIPVE
RLGFEPALNV RDSVMTQEKE RIAKAALAEL PEEGAILLDA GSTTGRLAEQ LPADRELTVV
TNSLSIALTL APRTHINLML LGGRLRTRTQ ATVDAWALRS LAESYVDVAF MAANGISTER
GLTTPDPAEA EVKRTMIASA RRCVLLADHT KVGNDHFARF AAVEDLDLVI TDTGLASGLA
DELEAAGPRV QVV
|
|---|
| |