Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4215 |
Symbol | |
ID | 9248089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 5033047 |
End bp | 5034636 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003682113 |
Protein GI | 297563139 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.269985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAC AGACCGTCCC GAAGGCTGCT CCGGAGACGG AGACGGAGCG GAAGCAGCGC TGGACGGAGA GCCCCTGGGC GACCCTGGTC GCCATCGCCT TCGGCGTGAT GATGGTGGCG CTGGACGGCA CCATCGTGGC CGTCGCCAAC CCCGCGATCG GCACGAGCCT GGGCGCCTCG CTGGCCGAAC TCCAGTGGGT GACCCACGGC TACCTGCTCG GCCTGGCGGT CTTCCTGATC ACGGCGGGCA AGATCGGCGA CCGCTTCGGC TACCGCAACA CCTACCTCGT GGGCGCGGTC GGCTTCGTAC TCAGCTCGGT GGCGATCGCG CTGTCGGCCG GTGTCATCAT GCTCGTCGCC TTCCGGGTGC TGCAAGGGGT TTTCGGCGCG CTGCTCCTGC CCTCGGCGAT GGGTCTGCTG CGCGCCAGCT TCCCGCCCAG CAAGCTCGGC CGGGCCTTCG GCGTCTTCGG CAGCCTCATC GGCGCCGCCA CGGCGGGCGG CCCCATCCTG GGCGGCGTAC TGGTCGGCTC CTTCGGCTGG GAGTCCGTCT TCTACATCAA CGTCCCGGTG GGCGCGGTCG CCCTCGGACT CGGTCTGTGG CTGCTGGCCG CCAACAAGCC GACCGACGCC GGAAGCCGGA TGGACGTGCC CGGCATCGTG CTGCTGAGCA TCGCCATCTT CGCCCTGGTG TGGGCCCTGG TGGAGGCGCC CAGCGTGGGC TGGGGCCACC CCGTCACACT GGGCTCGCTC GCCGTCACGG CGGTCTTCGC CGTGGCCTTC CTGGTGTGGG AGCGGCGCCC GGAACAGCCC CTGCTCCCGC TCGCCCTGTT CGCCAACCCC TCGGTCTCCA TCGGCGCCGT CCTGACGGTC GCGATGGCGC TGAGCCTGAT GGGGTCGCTG TTCTTCATCA CCTTCTACCT CCAGGGCGTG CGGGGCATGA GCCCCGCCCA GACCGGACTC CAGCTCATCT CCATGACCGC GCTGATGGCG GTCACCTCGC CGATCGCGGG CCGGGTCCTG GACCGGGTCG GCGCCCGGCC GCCCACGACG GTGGGCCTGC TGCTGGCGTC GGCGGGCATG TTCATGCTGT CGCTGCTGCG GACCGACACG GGAGTGCTCT ACATCTCGGC CGCGTTCGTC CTGCTCGGCA TGGGCCTGAG CCTGATCATG ACCGGTGCCA CGGCGGCCAT CATCGGCAAC GCGCCCGTGC GCTACGCCGG TGTGGCCTCG GCGGTGCAGC AGGCCGCCAT GCAGCTGGGC GGCTCGCTCG GCACGGCGGT CCTGGGCGCG GTCATGTCCG CGACCATCGT CGCCACCCTG CCCGGCCACT TCGCCGCCGC GGGGCTGGCC GAACCCGCCG CCGAGGAGTT GGCGGACATG CAGAGCGCCG TGGCCCAGGG CGGCGCGGTG CTGCCCGAGG GCGCGACCCC GGAGGTCGTG GCGGCCGTGA CCGGGGCCAG CAACCTGGCG TTCATGGAAG GGCTGCAACT CGCCTTCACC ATCGCGGCGG CGGTGATGCT GGTCGCCGCG GTGCTGTCGC TGTTCATGCG CTCGGGCAGG ATGACCGACG GCCCGGCCGT CCACATCTAG
|
Protein sequence | MTAQTVPKAA PETETERKQR WTESPWATLV AIAFGVMMVA LDGTIVAVAN PAIGTSLGAS LAELQWVTHG YLLGLAVFLI TAGKIGDRFG YRNTYLVGAV GFVLSSVAIA LSAGVIMLVA FRVLQGVFGA LLLPSAMGLL RASFPPSKLG RAFGVFGSLI GAATAGGPIL GGVLVGSFGW ESVFYINVPV GAVALGLGLW LLAANKPTDA GSRMDVPGIV LLSIAIFALV WALVEAPSVG WGHPVTLGSL AVTAVFAVAF LVWERRPEQP LLPLALFANP SVSIGAVLTV AMALSLMGSL FFITFYLQGV RGMSPAQTGL QLISMTALMA VTSPIAGRVL DRVGARPPTT VGLLLASAGM FMLSLLRTDT GVLYISAAFV LLGMGLSLIM TGATAAIIGN APVRYAGVAS AVQQAAMQLG GSLGTAVLGA VMSATIVATL PGHFAAAGLA EPAAEELADM QSAVAQGGAV LPEGATPEVV AAVTGASNLA FMEGLQLAFT IAAAVMLVAA VLSLFMRSGR MTDGPAVHI
|
| |