Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4214 |
Symbol | |
ID | 9248088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 5031893 |
End bp | 5032681 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003682112 |
Protein GI | 297563138 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.717984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGACC GCACCGGCCA GCACCGGGCC TATCTGGACG AACTGTTCGG ACTCACCGGC CGCCGTGCCC TCGTGACGGG AGGGAACTCG GGCATCGGCC GCGGCGTCGC CGAGGCCCTC GGACGCGCCG GGGCGAGCGT GCACCTGGTG GCCCGCGACG CCGGACGCCT GGCCCAGACG GCGGAGGAGT TCGCCGTCCA GGGCATCGAG GTCGGCACCA CCCCGGTCGA CCTGGCCGAC CGCGACGCGC TCGGGGAGCT CTGCGCGAGT GAACCGGTGA CGGGGGCGGA CATCCTGGTG ACCTCGGCCG CGGTCAACCA CCGGCCCCCG CTGGGGGAGA CGTCGGAGGA GGTCTGGGAG GAGACACTGG CGGTCAACCT CACCGCGCCG TACCTGCTGG GCCAGGCGTG CGGGCCGCGG ATGGCCGAGC GGGGCTGGGG CCGGATCCTC AACATCGGCT CCCAGCAGAC GTGGAGCGCG TTCGGCAACT CGGGGGTGTA CGGCGTCAGC AAGGCCGCCG TCGGCGGGCT CTCACGCTCC CAGGCCGAGG CGTGGTCGCC CCACGGCGTC ACCGCCAACA CCATCATTCC CGGTTTCGTG GTCACGCCGA TGACGATGCA CACGGTCGCG GTGCCCGGCC GCGAGGAGGA ACTCGCGGCC CGCACCATGG TCGGCCGCAA CGGCCTCCCC CGCGACTTCG CCGGTCTGGC GGTCTTCCTC GCCTCGGACG CCTCCGCCTT CGTCACCGGG CAGACGCTGG CCGCCGACGG CGGGCTCAGC GTGCACTGA
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Protein sequence | MSDRTGQHRA YLDELFGLTG RRALVTGGNS GIGRGVAEAL GRAGASVHLV ARDAGRLAQT AEEFAVQGIE VGTTPVDLAD RDALGELCAS EPVTGADILV TSAAVNHRPP LGETSEEVWE ETLAVNLTAP YLLGQACGPR MAERGWGRIL NIGSQQTWSA FGNSGVYGVS KAAVGGLSRS QAEAWSPHGV TANTIIPGFV VTPMTMHTVA VPGREEELAA RTMVGRNGLP RDFAGLAVFL ASDASAFVTG QTLAADGGLS VH
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