Gene Ndas_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4214 
Symbol 
ID9248088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5031893 
End bp5032681 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content74% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003682112 
Protein GI297563138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.717984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGACC GCACCGGCCA GCACCGGGCC TATCTGGACG AACTGTTCGG ACTCACCGGC 
CGCCGTGCCC TCGTGACGGG AGGGAACTCG GGCATCGGCC GCGGCGTCGC CGAGGCCCTC
GGACGCGCCG GGGCGAGCGT GCACCTGGTG GCCCGCGACG CCGGACGCCT GGCCCAGACG
GCGGAGGAGT TCGCCGTCCA GGGCATCGAG GTCGGCACCA CCCCGGTCGA CCTGGCCGAC
CGCGACGCGC TCGGGGAGCT CTGCGCGAGT GAACCGGTGA CGGGGGCGGA CATCCTGGTG
ACCTCGGCCG CGGTCAACCA CCGGCCCCCG CTGGGGGAGA CGTCGGAGGA GGTCTGGGAG
GAGACACTGG CGGTCAACCT CACCGCGCCG TACCTGCTGG GCCAGGCGTG CGGGCCGCGG
ATGGCCGAGC GGGGCTGGGG CCGGATCCTC AACATCGGCT CCCAGCAGAC GTGGAGCGCG
TTCGGCAACT CGGGGGTGTA CGGCGTCAGC AAGGCCGCCG TCGGCGGGCT CTCACGCTCC
CAGGCCGAGG CGTGGTCGCC CCACGGCGTC ACCGCCAACA CCATCATTCC CGGTTTCGTG
GTCACGCCGA TGACGATGCA CACGGTCGCG GTGCCCGGCC GCGAGGAGGA ACTCGCGGCC
CGCACCATGG TCGGCCGCAA CGGCCTCCCC CGCGACTTCG CCGGTCTGGC GGTCTTCCTC
GCCTCGGACG CCTCCGCCTT CGTCACCGGG CAGACGCTGG CCGCCGACGG CGGGCTCAGC
GTGCACTGA
 
Protein sequence
MSDRTGQHRA YLDELFGLTG RRALVTGGNS GIGRGVAEAL GRAGASVHLV ARDAGRLAQT 
AEEFAVQGIE VGTTPVDLAD RDALGELCAS EPVTGADILV TSAAVNHRPP LGETSEEVWE
ETLAVNLTAP YLLGQACGPR MAERGWGRIL NIGSQQTWSA FGNSGVYGVS KAAVGGLSRS
QAEAWSPHGV TANTIIPGFV VTPMTMHTVA VPGREEELAA RTMVGRNGLP RDFAGLAVFL
ASDASAFVTG QTLAADGGLS VH