Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4183 |
Symbol | |
ID | 9248057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4993674 |
End bp | 4996928 |
Gene Length | 3255 bp |
Protein Length | 1084 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | ATP-binding region ATPase domain protein |
Protein accession | YP_003682083 |
Protein GI | 297563109 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.843954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGAGC CGCTGACCGC TTCGGTGGCC GATCCCTACA ACACCGCCGA GCTGCGCCGA CGCGTTCTCG CCGCGTGGGC CGACGCCCCC GCGCGCTTCC GTGAGGACGC CAACGCGGAG GAGGACTTCG CACTCGGCGG CTACCGCGAC CGGGTCGTGG TCGAACTGGC CCAGAACGCC GCCGACGCCG CCCGCCGCGC GGGTGTCCCG GGCCGGCTGC GTCTGGCGCT GACCGGCCAC CGGCTGACCG CCGCCAACAC CGGCGCACCC CTGACCGCCG AGGGCGTGGA GTCGCTGGCC ACGCTGAGGG CCTCCACCAA GCGCGGCGAG CAGGGCTCGG CCGGACGCTT CGGCGTGGGC TTCTCCGCGG TGGCGGCGCT CAGCGACGAC GTCACCGTCG ACTCCGGCGG CTCGGCCGTC CGCTTCAGCG CCGAGGCCGC CCGCGCCGCG GTCACGGACC TGCTGGGCGA CGACGGCGCC CACAGCGGCC TCGCGCAGGA GGTGGAGAGC CGTTCCGGGC ACGTGCCCAT GCTGCGGCTG CCCTTCCCCG CCGAGGCCGT CAACCGTGTG ACCTCCGAGG CCCCTGAGGC AGGAGAGGGC GCCGAGGGCT ACGACACCGT CGTCACCCTC CTGCTGCGCG ACGACCGCGC GCGCGACCGG GTGCGCGAAC TCCTGGACCG GACCGGAGAG GCGCTCCTGC TCGCCCTGCC CGGCCTGGTC GAGGTGCGCG TGGACGTCGA GGGCGCCGAA CGCGTCCTCA CCCGCGAGGA GGCCGCCGGA ACGGCCGACC TGGTCACCGC GCACCTGGAC GGCGACGGCA CCCGGACCAC CCTCTGGCGG ACCCTCGAAC GCTCGGGCTC CTTCGACCCC GCCCTGCTCG CCGACCGGCC CACCGAGGAA CGGGACCGCA CGTCGTGGTC GCTGACGTGG GCGGTCCCCG TGGACGAGGA CGGTGCGGTC GCCGCCCTGC CCGCCGACGT CGAGTCCGTG GTCCACGCGC CCACGCCCAC CGACACCGAG CTCGACCTGC CCGCCGTCCT CATCGGCACC TTCCCGCTGG GCAGCGACCG GCGCGCGGTC CAGCCCGGGG CCGCCACCGA CCTGCTGCTC ATGGAGGCCG CGGAGGCCTA CTGCGCCCTG CTGCGGCGCT TCGACCCCCG GGCGTCGCTC GACCTGGTGC CCGGAACCCG TGTGGGCGGC GGCGCCGTCG ACGCCGTCTT CCGCGCCCGG GTGGCCGAGC CCCTCCAGGA CACGCCGTTC CTGGTGACGG CGGCCGGTGC GCCCGTCGCC CCGCGCGACG CCGTGCTCCT CGACACCGGG GGGCCGGGCG GGACCGACGG CCCCGCCGCC GACCTCGTCC GCGTCCTGTC CGAACTCGTT CCCCCGCTGC TGCCCGGGAG CTGGAGTCCG CGCCACCCGG CGCTGGCCGC CCTGCGCGTC CACCGCCTCG GCCTGGCCGA CGTCGCCGAC CTGCTCGCCG ACACCGACCG GCCCCCGCAC TGGTGGGCCG CGCTCTACGC CGCCCTGGAC CGGGCGGGCA GGGGCGGCGC CGACCTGGAC GAACTCGGCG CCCTGCCCGT CCCGCTGGCC GACGGCAGGC TCGTGCGCGG TCCCCGTTCG CTGCTGGTGC CCTCGCAGGA CTGGTCGGCG GACGGCGCGC GCGGTGAAGA CCGGGACGGC TGGGAGGACC GGGGAGAGCG GGACGACCGG GACGACCGAG GGGAAGGGGA CGACCGGCGC GAGCGCGGGC CCCTGGACGC CCTGGCCGCC CTGGGCGTGC GCGTCGTGCA CCCCGAGGCC GTGCACCCCC TCCTCAACCG CCTGGGCGCG GTGGAGGCCA GCGCCGCGAC CGTTCTGCGC GACGGGCGCA CCGAGGCCGC CGTCCGCGCC TCCCTGGACG CCGACGACCC CGAACCCGTG GCCGAGGCCG TGCTCGGTCT GGTGTCCGCC TCGGGGATCA GCGCCGCCGA CGTGCCCTGG CTCTCCGAGC TGGCCCTGCG CGACGACGAG GACGGCTACT CGGTCGCCGC CGAGCTCCTC GTGCCCGGCG CGCCCCTGGC CGACCTCCTC GTGGACGACG CCCCCTTCGG CACCGTGCAC CCGGACCTGG TGGAACGGCA CGGGACCGGG GTCCTGCGCG CCGTCGGCGC GCTGTGGGAG CTGACCGCGG TCCGCGCCGA GGAGGTCGCG CTGGGCGAGG ACCTGGCCTC GGTCTTCGAC GGCGCGGCGG GCGAGGAGGG CCCGGACGGC CTGGAGGACT GGGCCGACGA GGTCCTCGAA CGCGTGGGCG ACCCGGAGCT GCCGCCGGTC GTCCCCGAGC TGGTGTGCGT CGCCGACCTG GACTACGTGG CCGACGAGCA GTGGCCCCGC GCCCTGGCCA TGCTCGCCGA GGGGCCGCTG CGGGAGGCGG TGACCGCCCC CGCCCGCGTG CTGCTGCCCG ACGGCCGCGT GACGGACGTG CCCTCCTACA CCGCCTGGTG GCTGCGCACG CGGGCCCTGC TGGGCGGGAG CGCGCCCGCG GGGCTGCGGC TCGGAGACGC GGACCCCGCC CTGGTGGGCC TGTACGACGA GGTGAGCGCC GACGTCGATC CGGAGTTCGC CCGCGCGCTG GGCGTGCGCA CCACCCTGGA GGACGTGCTG GCGGACCCGG ACGGCGCGGA CGACCTGCTC GCCCGGCTGG CCGACCCCCA GCGGCACGTG GACCGCGCGT CGCTGCGCAG GGTGTGGGCC GCCCTGGCCG GGGTGGACGC CGACCTGGTC ACCCCGCCGT CCCGCGTGCG GGCGGTGCGG GGCGGGTCGA TCGTGGTGGC CGACGCCGAG GACGCGGTCG TGGTGGACTC CCCGGACCTG CTGCCGCTGC TGGAGGAGCA GGAGCGGGCC CTGGTGCTCG CCCCGGCCGA GACGGCCGAG GCCGTGGCGG ACGTGCTCGA CCTGGACCTG GCCAGCGAGG CCGTGACGGG AAGGGTCGGG TCCGCGGGGC AGATGCGCCA GGTCCCGGAC GAGGCGGACC TCTTCCTCGA CCCGGCGGGG GAGCCCGACC GCACCTACCT GCACCACCAG ACGCTCACGG TGGACGGGGT GGAGGTGGAG TGGTACGTCG CGGACGGCTC GGCGCACGCC TCGACCACTG ACGGGCTGGC CCGGGCGCTG TGCTGGCGCG CGGGGCAGTG GTCCAGGAGG CACGTGCTGG CCGACGCGCT GCGGGAACCG GGGGCGGTGG CGCGGCTGCT GGCCGAGGCC GACCTGGACG ACTGA
|
Protein sequence | MAEPLTASVA DPYNTAELRR RVLAAWADAP ARFREDANAE EDFALGGYRD RVVVELAQNA ADAARRAGVP GRLRLALTGH RLTAANTGAP LTAEGVESLA TLRASTKRGE QGSAGRFGVG FSAVAALSDD VTVDSGGSAV RFSAEAARAA VTDLLGDDGA HSGLAQEVES RSGHVPMLRL PFPAEAVNRV TSEAPEAGEG AEGYDTVVTL LLRDDRARDR VRELLDRTGE ALLLALPGLV EVRVDVEGAE RVLTREEAAG TADLVTAHLD GDGTRTTLWR TLERSGSFDP ALLADRPTEE RDRTSWSLTW AVPVDEDGAV AALPADVESV VHAPTPTDTE LDLPAVLIGT FPLGSDRRAV QPGAATDLLL MEAAEAYCAL LRRFDPRASL DLVPGTRVGG GAVDAVFRAR VAEPLQDTPF LVTAAGAPVA PRDAVLLDTG GPGGTDGPAA DLVRVLSELV PPLLPGSWSP RHPALAALRV HRLGLADVAD LLADTDRPPH WWAALYAALD RAGRGGADLD ELGALPVPLA DGRLVRGPRS LLVPSQDWSA DGARGEDRDG WEDRGERDDR DDRGEGDDRR ERGPLDALAA LGVRVVHPEA VHPLLNRLGA VEASAATVLR DGRTEAAVRA SLDADDPEPV AEAVLGLVSA SGISAADVPW LSELALRDDE DGYSVAAELL VPGAPLADLL VDDAPFGTVH PDLVERHGTG VLRAVGALWE LTAVRAEEVA LGEDLASVFD GAAGEEGPDG LEDWADEVLE RVGDPELPPV VPELVCVADL DYVADEQWPR ALAMLAEGPL REAVTAPARV LLPDGRVTDV PSYTAWWLRT RALLGGSAPA GLRLGDADPA LVGLYDEVSA DVDPEFARAL GVRTTLEDVL ADPDGADDLL ARLADPQRHV DRASLRRVWA ALAGVDADLV TPPSRVRAVR GGSIVVADAE DAVVVDSPDL LPLLEEQERA LVLAPAETAE AVADVLDLDL ASEAVTGRVG SAGQMRQVPD EADLFLDPAG EPDRTYLHHQ TLTVDGVEVE WYVADGSAHA STTDGLARAL CWRAGQWSRR HVLADALREP GAVARLLAEA DLDD
|
| |