Gene Ndas_4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4176 
Symbol 
ID9248050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp4986537 
End bp4987127 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content77% 
IMG OID 
Product2'-5' RNA ligase 
Protein accessionYP_003682077 
Protein GI297563103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.15981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGT TCGCGGCACT GGACCCGCCC CCCGACACGG CGCACGCGCT GCGCCGGGCC 
GTCGACCGGG GCCGCGGCCA CACCCCCGGC CTGCGCTGGG CCGATCCCGG CGAGTGGCAC 
CTCACCCTGG TCTTCCTCGG CGAGGTGGAC GAGGCCCTCC TGCCCGCGCT CGGCGACGCC 
CTCGGCCGGG AGGCCCGCGG GCACCGGCCC TTCCGCATCA CCGCCGAGGG CTGGGGAGCC 
TTTCCGGGCG ACCTCCGCCG CGCCTCCGTG CTCTGGGCCG GACTCGGCGG CGACACCGCG 
TCCCTCCACG CCCTCGCCGA CGGACTGCGC GCCGCCGCCG CCGAAGTCGG CGTACCCGTC 
GAGAACCGCC CCTACGTGCC GCACATCACG GTGGCCCGCA GCCGTCCCGC GCGCGACCTC 
ACCGGAACCG CCGACGCCCT CGGCCCGCTG CCAGGCCACG GGTGGCCGGT CCGCGAGGCG 
CATCTCGTGG AGAGCAGGCC GGAGCGGGAG GACCGCTACC GAACCGTCCG GACCTGGCGG 
TTAGGCTGGG AGGCGGATCC CACCCGACCT CCTGAGCGGA GCACGTCATG A
 
Protein sequence
MRLFAALDPP PDTAHALRRA VDRGRGHTPG LRWADPGEWH LTLVFLGEVD EALLPALGDA 
LGREARGHRP FRITAEGWGA FPGDLRRASV LWAGLGGDTA SLHALADGLR AAAAEVGVPV 
ENRPYVPHIT VARSRPARDL TGTADALGPL PGHGWPVREA HLVESRPERE DRYRTVRTWR 
LGWEADPTRP PERSTS