Gene Ndas_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4172 
Symbol 
ID9248046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4983457 
End bp4984458 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content72% 
IMG OID 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003682073 
Protein GI297563099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.536145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAGGA ACAAGAAGGA ACCCCCCATC AAGATCATCT CGCACCGCGG TGCGTCGGGG 
CACCGCCCCG AGCACACGCT GGCCTCCTAC GAGCTGGGGG CCCGGCACGG CGGCGACTTC
ATCGAGATGG ACCTGGTCTC GACCAGGGAC GGGAGGCTGG TCTGCCGCCA CGAGCAGGAG
ATCGGCGGGA CCACGGACGT GGCCGAGCGC CCCGAGTTCG CCGACCGGCG CACCACGCGC
ACCGTCGACG GGCGCGAGGT GACCGGGTTC TTCGCCCAGG ACTTCACGCT GGAGGAGATC
CGGACGCTGC GCGCGGTGGA GCGCCTCCGG GACGTGCGCG CGGACAACGC CGTGATGGAC
GGGACCTACG GGATCCCGAC CCTGGAGGAG GTCATCGAGC TGGCGCTGGC GCTGACCAAG
GAGCTGGGCC GCCCGATCGG GATCTACCCC GAGACCAAGC ACCCCGCCTA CCACGAGGCG
CAGGGCCTGG AGCTGGAGCC GGTGCTGATC CAGGCCCTGC GCGAGGCGGG GCTGACGGGC
CCCGAGCCGC TGGTGCCGGT GTTCCTCCAG TCCTTCGAGG CCGACAGCCT GCGCAAGCTG
GCCGTGACGG AGCTGCCGCT GGTCTACCTC ATGGGCTCCG AGGAGCGCTG GCTGCACCAC
ACCACGCCGG ACGGCCTGGC CGAGGTGGCG ACGTTCGCGC ACGCGATCGG CCCGGCCAAG
AGCCTGGTCG TGCCCGTGGA GGACGGGGTG CTCGGGGAGC CGACCGACCT GGTGGAGAAC
GCGCACGCGG CCGGGCTCCT GGTGCACCCG TACACGTTCC GCAGCGAGAA CCACTTCCTT
CCCGCCGAGC TGCGCTCGGA AGGCGGACCG GGCGACTACG GCTCCTTCGC CGCCGAGTAC
GAGGCCTTCT TCGAGGCCGG GGTGGACGGC GTGTTCACCG ACTTCTCCCG GCACGCCTTC
CTGGCGCGCG AGCACTTCCT GGACCCGCAG CCCGAGGGGT AG
 
Protein sequence
MRRNKKEPPI KIISHRGASG HRPEHTLASY ELGARHGGDF IEMDLVSTRD GRLVCRHEQE 
IGGTTDVAER PEFADRRTTR TVDGREVTGF FAQDFTLEEI RTLRAVERLR DVRADNAVMD
GTYGIPTLEE VIELALALTK ELGRPIGIYP ETKHPAYHEA QGLELEPVLI QALREAGLTG
PEPLVPVFLQ SFEADSLRKL AVTELPLVYL MGSEERWLHH TTPDGLAEVA TFAHAIGPAK
SLVVPVEDGV LGEPTDLVEN AHAAGLLVHP YTFRSENHFL PAELRSEGGP GDYGSFAAEY
EAFFEAGVDG VFTDFSRHAF LAREHFLDPQ PEG