Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4168 |
Symbol | |
ID | 9248042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4977991 |
End bp | 4978644 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_003682069 |
Protein GI | 297563095 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.481002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACCACC AAGACCCCGC CGAACTGCGC AAACCGTACC TGGGCGCGCC CCTGAGGCGC TCCGGCCTCG CCGACCACCC CATGACGCAG TTCCACCTGT GGTTCGACGA GGCCTACGAC TCCGGACTGG CCGAACCCAA CGCCATGGTC CTGGCGTCCG TGGAGCCCTC GGGCATGCCC CGCGCCCGCA CCGTGCTGAT GAAGGGCTAC GACAGCACGG GACTGCGCTT CTTCACCAAC TACACCTCGC GCAAGGGACG GGCCCTGGAG GCCGACCCGC GCGCCAGCGC GGTCTTCCCC TGGCACGCCA TCCGGCGCCA GGTCCTGCTG GCCGGACGGG TGGAGCGGCT CAGCGACGAG GAGAACGACC GCTACTTCGC CTCGCGTCCG CGCGGCTCCC AGCTGGGCGC CTGGGCCAGC GAGCGCCAGT CGCGGCCGGT GGCGGACCGG GCCGAACTCG ACCGGCTCTA CCGGGAGTTC GACACGGTCT GGGCCGCCGA GGAGGAGATC CCCCGGCCCG CCTACTGGGG CGGCTTCCGG CTCGTGCCGA GCGAGGTGGA GTTCTGGCAG GGCGGTGCCG ACCGCATGCA CGACCGGTTC CGCTACCTGC GCGAACCCGA CGGCTCCTGG AGCGTGGAGC GCCTGGCGCC CTGA
|
Protein sequence | MDHQDPAELR KPYLGAPLRR SGLADHPMTQ FHLWFDEAYD SGLAEPNAMV LASVEPSGMP RARTVLMKGY DSTGLRFFTN YTSRKGRALE ADPRASAVFP WHAIRRQVLL AGRVERLSDE ENDRYFASRP RGSQLGAWAS ERQSRPVADR AELDRLYREF DTVWAAEEEI PRPAYWGGFR LVPSEVEFWQ GGADRMHDRF RYLREPDGSW SVERLAP
|
| |