Gene Ndas_4168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4168 
Symbol 
ID9248042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4977991 
End bp4978644 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content72% 
IMG OID 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_003682069 
Protein GI297563095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.481002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCACC AAGACCCCGC CGAACTGCGC AAACCGTACC TGGGCGCGCC CCTGAGGCGC 
TCCGGCCTCG CCGACCACCC CATGACGCAG TTCCACCTGT GGTTCGACGA GGCCTACGAC
TCCGGACTGG CCGAACCCAA CGCCATGGTC CTGGCGTCCG TGGAGCCCTC GGGCATGCCC
CGCGCCCGCA CCGTGCTGAT GAAGGGCTAC GACAGCACGG GACTGCGCTT CTTCACCAAC
TACACCTCGC GCAAGGGACG GGCCCTGGAG GCCGACCCGC GCGCCAGCGC GGTCTTCCCC
TGGCACGCCA TCCGGCGCCA GGTCCTGCTG GCCGGACGGG TGGAGCGGCT CAGCGACGAG
GAGAACGACC GCTACTTCGC CTCGCGTCCG CGCGGCTCCC AGCTGGGCGC CTGGGCCAGC
GAGCGCCAGT CGCGGCCGGT GGCGGACCGG GCCGAACTCG ACCGGCTCTA CCGGGAGTTC
GACACGGTCT GGGCCGCCGA GGAGGAGATC CCCCGGCCCG CCTACTGGGG CGGCTTCCGG
CTCGTGCCGA GCGAGGTGGA GTTCTGGCAG GGCGGTGCCG ACCGCATGCA CGACCGGTTC
CGCTACCTGC GCGAACCCGA CGGCTCCTGG AGCGTGGAGC GCCTGGCGCC CTGA
 
Protein sequence
MDHQDPAELR KPYLGAPLRR SGLADHPMTQ FHLWFDEAYD SGLAEPNAMV LASVEPSGMP 
RARTVLMKGY DSTGLRFFTN YTSRKGRALE ADPRASAVFP WHAIRRQVLL AGRVERLSDE
ENDRYFASRP RGSQLGAWAS ERQSRPVADR AELDRLYREF DTVWAAEEEI PRPAYWGGFR
LVPSEVEFWQ GGADRMHDRF RYLREPDGSW SVERLAP