Gene Ndas_4129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4129 
Symbol 
ID9248003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4931647 
End bp4932462 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content74% 
IMG OID 
Producttwo component transcriptional regulator, LytTR family 
Protein accessionYP_003682030 
Protein GI297563056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCCCG AACTGCGGGT GCTGGTGGTC GAGGACGAGG CCTCCACCCG CCAGGAGATG 
GCGTCCCTGC TCGGTGACAT GCCCGAGGTG GCGGAGGTCC TGGTGGCCGA CAACGGCGCC
ACCGCCGTGC GGCTGCTGGG CACCACCACC ATCGACGCCG CGTTCCTGGA CATCCTCATG
CCCGGTCTGG ACGGCATGGA CGTGGCCCGG GTGCTGAGCG TGCTGTCCGA GCCCCCGTCC
ATCGTGTTCG TGACCGCCTC CGAGGCCCAC GCGGTGGAGG CCTTCGGCAT CGGCGCCGTG
GACTACCTGC TCAAGCCGAT CCGGCCCGAG CGGCTGGCCG AGGCGGTGGG CCGCATCGCC
CAGCTGCGCA GGCCCGGGGG AGGGGCCCCG CCCGCCGAGG ACCTGCACGT GGTGCAGATC
GACACCGGCA GGCGCACGGT GTTCGTCAAA CGCGACGACG TGCAGTTCGT GGAGGCCCAG
GGCGACTACG TGCGCCTGCA CACCTCCGAC GGGGGCCACC TCATCCGCCT GTCGCTGTCC
TACCTGGAGG AGGTGTGGGC CTCGGCCGGG TTCGTCCGGG TCCACCGGGG GTTCCTGATC
GCCATCCCGT GGGTGCGCGA CCTGCGGGTG ACCTCCTCGT CCGGCCTGGT GGCGGGAACC
CCGGCCGGGG ACGTGCCGGT GAGCCGCCGC CACGGCCGCC ACCTGCGCGC CCAGCTGCTG
GAGGCGGCCC GGCGCGACCA GCTCGGCCGG TCCGCGAACG CCCAGGGCGG CCCCGCCCCC
CGGTCGCGGG ACGGTGAGGG GGAGCAGGCG CCGTGA
 
Protein sequence
MKPELRVLVV EDEASTRQEM ASLLGDMPEV AEVLVADNGA TAVRLLGTTT IDAAFLDILM 
PGLDGMDVAR VLSVLSEPPS IVFVTASEAH AVEAFGIGAV DYLLKPIRPE RLAEAVGRIA
QLRRPGGGAP PAEDLHVVQI DTGRRTVFVK RDDVQFVEAQ GDYVRLHTSD GGHLIRLSLS
YLEEVWASAG FVRVHRGFLI AIPWVRDLRV TSSSGLVAGT PAGDVPVSRR HGRHLRAQLL
EAARRDQLGR SANAQGGPAP RSRDGEGEQA P