| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4108 |
|---|
| Symbol | |
|---|
| ID | 9247982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4904830 |
|---|
| End bp | 4905513 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003682010 |
|---|
| Protein GI | 297563036 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.724357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.672697 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCAC AGGGGTTGAA CGCCGTCGCG GGACGGGTCC AGCGCCCCGT GCCGCTGCGT
GAAGCCGTGT ACGAGGCCAT CCTCGACCTG ATCACCAACC GGTCGCTCTC ACCCGGTCAG
CACCTGGTGG AGACCGAGCT GGCCCAGACC CTCGGCGTCT CGCGCCAGCC GGTCCGCGAG
GCGATGCAGC GGCTCAGCAA CGAGGGGTGG GTGGACCTGC GGCCCGGGTA CGGGGCGTTC
GTGCACACGC CCACCGAGAG CGAGGCCGAC CAGCTCCTGG CCGTGCGCGC CCTGCTGGAG
ACGGAGTCGG CCCGCCTGGC CGCGCAGAAC GCCTCGACCG AGCAGATCGG GACGATGCGC
GACCTGGTCG CCGCCGGGCG CGCGGCCACC GACCGCGCCG ACACCGACGC GGTCGTCCAG
GCCAACGCCG ACTTCCACCG CACCGTCACC GAGGCCTCGG GCAACCGGGT GCTCGCCGAG
CTGGCCGCGC AGGTCGACCG GCGGGTGCGC TGGTACTACG CCCCGGTCGC CCGCGTCCGC
GGCGCCGCCT CCTGGGACGA GCACTCCGCC CTCGTCGACG TCATCGAGGG CCGTGACGCG
GACGCGGCGC TGCGGCTGAT GAGCGAGCAC ACCGAGCGCA CCCGCCGCAC CTACCACGAG
CAGGTGGACG GCGTGGAGGG CTGA
|
|---|
| Protein sequence | MSPQGLNAVA GRVQRPVPLR EAVYEAILDL ITNRSLSPGQ HLVETELAQT LGVSRQPVRE
AMQRLSNEGW VDLRPGYGAF VHTPTESEAD QLLAVRALLE TESARLAAQN ASTEQIGTMR
DLVAAGRAAT DRADTDAVVQ ANADFHRTVT EASGNRVLAE LAAQVDRRVR WYYAPVARVR
GAASWDEHSA LVDVIEGRDA DAALRLMSEH TERTRRTYHE QVDGVEG
|
|---|
| |