Gene Ndas_4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4106 
Symbol 
ID9247980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4903408 
End bp4904226 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content72% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IIB 
Protein accessionYP_003682008 
Protein GI297563034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.607815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.307406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA TGGTCTTTCC CCGGGTTATC GCGACCGATC TCGACGGCAC ACTCCTGGAC 
GCGGGGGGCC TGGTCTCCGA ACGCAACCGG CTGGCGCTGG TCGCCGCCGC GGAGGCGGGC
GTCAGGGTGG TGGTCTCCAC CGCGCGACCG CCGCGGACCA CGCAGCACAT CGCCGAGCAG
CTCCCCTGCG CCGCCGTGCT CTGCGGCAAC GGCTCGCTGG CCCACGTGCC CGGCGACGAA
CCGCTGGTAC GCGCCATCTC CCCGGAGACC GCCCGTTCGG TGGTCGAGAA GGTCAACGCG
GAGCTGCCCG GGATCGGCTA CGGCATCGAG ACCGGCACCG ACTTCTTCCA CGACGCCGAC
TACCACCTGG AGCCGTGGCT GTCCGGCGAG TGGGTGCGCG AGGTGCTGGA GGACACCGAG
ACCCTGTTGA GGCGGGCCAC CCCGATCACC AAGATGCTCG TGCGCTCCCG CGACATGCGG
GTGGAGGAGC TGCACGAGAC GGTCGCGGCG GCGGTCGGGT CGCTGGCGGA GGTGACCTTC
TCGGGCAGCT ACAGCCTGCT GGAGCTGAGC GCGCCGGGCG TGAACAAGGG CAGCACCCTC
GCGATGGTCT GCGAGCGGTG GGGGGTGGCC GCCGAGGAGG TGGTGGCCTT CGGCGACATG
CCCAACGACC TGGCCGCGCT GTCCTGGGCG GGCGGGGGTT ACGCCATGGC CAGCGGGCAC
CCGGACCTGC TCGACCCGGC GCTGGGGCTG CGGGTGGCCC CGTCCGCCAA CGAGGACGGT
GTGGGCCGGG TGGTCGAGCA GCTCCTGGCA GAGCGCTGA
 
Protein sequence
MPTMVFPRVI ATDLDGTLLD AGGLVSERNR LALVAAAEAG VRVVVSTARP PRTTQHIAEQ 
LPCAAVLCGN GSLAHVPGDE PLVRAISPET ARSVVEKVNA ELPGIGYGIE TGTDFFHDAD
YHLEPWLSGE WVREVLEDTE TLLRRATPIT KMLVRSRDMR VEELHETVAA AVGSLAEVTF
SGSYSLLELS APGVNKGSTL AMVCERWGVA AEEVVAFGDM PNDLAALSWA GGGYAMASGH
PDLLDPALGL RVAPSANEDG VGRVVEQLLA ER