Gene Ndas_4070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4070 
Symbol 
ID9247942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4865402 
End bp4867219 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content70% 
IMG OID 
Productmethionyl-tRNA synthetase 
Protein accessionYP_003681972 
Protein GI297562998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.310796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGA ATCGTCACAT CCTGACCGCG GTCGCCTGGC CCTATGCCAA CGGACCGCGC 
CACATCGGTC ACGTGTCCGG CTTCGGAGTC CCCTCCGACG TCTTCTCCCG CTTCCAGCGA
ATGTCGGGCA ACCACGTGCT GATGGTCAGC GGGACCGACG AGCACGGCAC CCCGGTGCAG
GTCCTGGCCG ACCAGGAGGG CGTGACCCCC CGGGAGCTGG CCGACCGCTA CAACCGGATC
ATCGCCGAGG ACCTGGTGGG CCTGGGTCTG TCCTACGACC TCTTCACCCG CACCACCACC
GGCAACCACT ACGCCGTCGC GCAGCAGCTG TTCACCGCGC TGCACGAGAA CGGGTACGTG
TTCGCCCACA CGACCAAGGG CGCGGTGTCC CCGTCCACCG GCCGTACGCT GCCCGACCGC
TACATCGAGG GCATCTGCCC CATCTGCGGT TACGACGGCG CGCGCGGCGA CCAGTGCGAC
AACTGCGGCA ACCAGCTCGA CCCGATCGAC CTCATCTCGC CGCGTTCGCG GATCAACGGC
GAGAAGCCGG AGTTCGTGGA CACCGAGCAC TTCATGCTCG ACCTGCCCGC CTTCGCCGAC
GCCCTGACCA CCTGGCTCAA GGGCAAGGAG GGGCAGTGGC GCCCCAACGT CCTCAAGTTC
TCCCTGAACC TGGTGGAGGA CCTCCAGCCG CGCGCGGTCA CCCGCGACCT CAACTGGGGC
GTGCCCGTCC CGCTGGAGGG CTGGAGCGAC AACGCCAACA AGCGCCTGTA CGTGTGGTTC
GACGCGGTCA TCGGCTACCT GTCGGCGTCG GTGGAGTGGG CCCGGCGCAT CGGTGAGCCC
GAGGCCTGGC GCCGCTGGTG GCAGGGCGAC GAGGCCCGGT CCTACTACTT CATGGGCAAG
GACAACATCG TCTTCCACTC GGTGGTCTGG CCCGCGATCC TGCTGGGCCA CAACGGCGAG
GGGGACCGGG GAGGCGAGCC CGGCCCGCTG GGCGAGCTGA AGGTGCCCAC CGAGGTGGTC
TCCAGCGAGT TCCTCACCAT GGAGGGGCGC AAGTTCTCCT CCTCGCGGCG CGTGGTGATC
TACGTGCGCG ACTTCCTGGA GCGCTACTCC GCCGACGCGC TGCGCTACTA CATCATGGCC
GCCGGTCCCG AGACGCAGGA CACCGACTTC ACCTGGGCCG AGTTCGTGCG CCGCAACAAC
GACGAGCTGG TGGCGGCCTG GGGCAACCTG GTCAACCGCT CCATCTCGAT GGCGGCCAAG
AACCTGGGCG AGATCCCGGC GGCCGGTGAG CTGACCGACG AGGACCGCCG GGTGCTGGAG
GACTCGCGGG CCGCGTTCGC CAGGGTGGGG GAGCGACTGG AGCGGTCCCA GTTCAAGGCG
GGCCTGCAGG AGGCCATGCG CACCGTGGCC GAGGCCAACA AGTACATCTC CGACCAGGCC
CCGTGGGCGC TGAAGAAGAC CGACCCCGAG CGGATGGCCA CCGTGCTGCA CGTGGCGCTC
CAGCTGGTCC AGGACGCCAA CACGCTGCTC ACCCCGTACC TGCCCGAGTC GGCTAACAAG
GTGTACGCGA TGCTCGGCGG CACCGGCACC TGGACGGGCA TGCCGCGCAT CGACGCCGGG
CGCGACACGA TCGGCGGCTC GGAGGAGGAG GTGGAGTACC CGGTCATCAC CGGGGACTAC
GCCGACAACG AGGCGCGCTG GGAGTCGCGG CCGATCGCGG TGGGCACCCC GCTCGGCCGT
CCGGAGCCGC TGTTCGCCAA GCTCGACCAG TCGGTCGTGG ACGAGGAGCT GGCCCGCCTG
GAGGGCGCCG CCGGGTAG
 
Protein sequence
MSSNRHILTA VAWPYANGPR HIGHVSGFGV PSDVFSRFQR MSGNHVLMVS GTDEHGTPVQ 
VLADQEGVTP RELADRYNRI IAEDLVGLGL SYDLFTRTTT GNHYAVAQQL FTALHENGYV
FAHTTKGAVS PSTGRTLPDR YIEGICPICG YDGARGDQCD NCGNQLDPID LISPRSRING
EKPEFVDTEH FMLDLPAFAD ALTTWLKGKE GQWRPNVLKF SLNLVEDLQP RAVTRDLNWG
VPVPLEGWSD NANKRLYVWF DAVIGYLSAS VEWARRIGEP EAWRRWWQGD EARSYYFMGK
DNIVFHSVVW PAILLGHNGE GDRGGEPGPL GELKVPTEVV SSEFLTMEGR KFSSSRRVVI
YVRDFLERYS ADALRYYIMA AGPETQDTDF TWAEFVRRNN DELVAAWGNL VNRSISMAAK
NLGEIPAAGE LTDEDRRVLE DSRAAFARVG ERLERSQFKA GLQEAMRTVA EANKYISDQA
PWALKKTDPE RMATVLHVAL QLVQDANTLL TPYLPESANK VYAMLGGTGT WTGMPRIDAG
RDTIGGSEEE VEYPVITGDY ADNEARWESR PIAVGTPLGR PEPLFAKLDQ SVVDEELARL
EGAAG