Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4070 |
Symbol | |
ID | 9247942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4865402 |
End bp | 4867219 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | methionyl-tRNA synthetase |
Protein accession | YP_003681972 |
Protein GI | 297562998 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.310796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCGA ATCGTCACAT CCTGACCGCG GTCGCCTGGC CCTATGCCAA CGGACCGCGC CACATCGGTC ACGTGTCCGG CTTCGGAGTC CCCTCCGACG TCTTCTCCCG CTTCCAGCGA ATGTCGGGCA ACCACGTGCT GATGGTCAGC GGGACCGACG AGCACGGCAC CCCGGTGCAG GTCCTGGCCG ACCAGGAGGG CGTGACCCCC CGGGAGCTGG CCGACCGCTA CAACCGGATC ATCGCCGAGG ACCTGGTGGG CCTGGGTCTG TCCTACGACC TCTTCACCCG CACCACCACC GGCAACCACT ACGCCGTCGC GCAGCAGCTG TTCACCGCGC TGCACGAGAA CGGGTACGTG TTCGCCCACA CGACCAAGGG CGCGGTGTCC CCGTCCACCG GCCGTACGCT GCCCGACCGC TACATCGAGG GCATCTGCCC CATCTGCGGT TACGACGGCG CGCGCGGCGA CCAGTGCGAC AACTGCGGCA ACCAGCTCGA CCCGATCGAC CTCATCTCGC CGCGTTCGCG GATCAACGGC GAGAAGCCGG AGTTCGTGGA CACCGAGCAC TTCATGCTCG ACCTGCCCGC CTTCGCCGAC GCCCTGACCA CCTGGCTCAA GGGCAAGGAG GGGCAGTGGC GCCCCAACGT CCTCAAGTTC TCCCTGAACC TGGTGGAGGA CCTCCAGCCG CGCGCGGTCA CCCGCGACCT CAACTGGGGC GTGCCCGTCC CGCTGGAGGG CTGGAGCGAC AACGCCAACA AGCGCCTGTA CGTGTGGTTC GACGCGGTCA TCGGCTACCT GTCGGCGTCG GTGGAGTGGG CCCGGCGCAT CGGTGAGCCC GAGGCCTGGC GCCGCTGGTG GCAGGGCGAC GAGGCCCGGT CCTACTACTT CATGGGCAAG GACAACATCG TCTTCCACTC GGTGGTCTGG CCCGCGATCC TGCTGGGCCA CAACGGCGAG GGGGACCGGG GAGGCGAGCC CGGCCCGCTG GGCGAGCTGA AGGTGCCCAC CGAGGTGGTC TCCAGCGAGT TCCTCACCAT GGAGGGGCGC AAGTTCTCCT CCTCGCGGCG CGTGGTGATC TACGTGCGCG ACTTCCTGGA GCGCTACTCC GCCGACGCGC TGCGCTACTA CATCATGGCC GCCGGTCCCG AGACGCAGGA CACCGACTTC ACCTGGGCCG AGTTCGTGCG CCGCAACAAC GACGAGCTGG TGGCGGCCTG GGGCAACCTG GTCAACCGCT CCATCTCGAT GGCGGCCAAG AACCTGGGCG AGATCCCGGC GGCCGGTGAG CTGACCGACG AGGACCGCCG GGTGCTGGAG GACTCGCGGG CCGCGTTCGC CAGGGTGGGG GAGCGACTGG AGCGGTCCCA GTTCAAGGCG GGCCTGCAGG AGGCCATGCG CACCGTGGCC GAGGCCAACA AGTACATCTC CGACCAGGCC CCGTGGGCGC TGAAGAAGAC CGACCCCGAG CGGATGGCCA CCGTGCTGCA CGTGGCGCTC CAGCTGGTCC AGGACGCCAA CACGCTGCTC ACCCCGTACC TGCCCGAGTC GGCTAACAAG GTGTACGCGA TGCTCGGCGG CACCGGCACC TGGACGGGCA TGCCGCGCAT CGACGCCGGG CGCGACACGA TCGGCGGCTC GGAGGAGGAG GTGGAGTACC CGGTCATCAC CGGGGACTAC GCCGACAACG AGGCGCGCTG GGAGTCGCGG CCGATCGCGG TGGGCACCCC GCTCGGCCGT CCGGAGCCGC TGTTCGCCAA GCTCGACCAG TCGGTCGTGG ACGAGGAGCT GGCCCGCCTG GAGGGCGCCG CCGGGTAG
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Protein sequence | MSSNRHILTA VAWPYANGPR HIGHVSGFGV PSDVFSRFQR MSGNHVLMVS GTDEHGTPVQ VLADQEGVTP RELADRYNRI IAEDLVGLGL SYDLFTRTTT GNHYAVAQQL FTALHENGYV FAHTTKGAVS PSTGRTLPDR YIEGICPICG YDGARGDQCD NCGNQLDPID LISPRSRING EKPEFVDTEH FMLDLPAFAD ALTTWLKGKE GQWRPNVLKF SLNLVEDLQP RAVTRDLNWG VPVPLEGWSD NANKRLYVWF DAVIGYLSAS VEWARRIGEP EAWRRWWQGD EARSYYFMGK DNIVFHSVVW PAILLGHNGE GDRGGEPGPL GELKVPTEVV SSEFLTMEGR KFSSSRRVVI YVRDFLERYS ADALRYYIMA AGPETQDTDF TWAEFVRRNN DELVAAWGNL VNRSISMAAK NLGEIPAAGE LTDEDRRVLE DSRAAFARVG ERLERSQFKA GLQEAMRTVA EANKYISDQA PWALKKTDPE RMATVLHVAL QLVQDANTLL TPYLPESANK VYAMLGGTGT WTGMPRIDAG RDTIGGSEEE VEYPVITGDY ADNEARWESR PIAVGTPLGR PEPLFAKLDQ SVVDEELARL EGAAG
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