| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4041 |
|---|
| Symbol | |
|---|
| ID | 9247913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4834450 |
|---|
| End bp | 4835484 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | metalloendopeptidase, glycoprotease family |
|---|
| Protein accession | YP_003681944 |
|---|
| Protein GI | 297562970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACC TGCCGCTGGT CATGGGGATC GAGACGTCCT GCGACGAGAC CGGCGTGGCC
CTGGTGCGCG GCTGCGAGCT GCTCGGCGAC GCCGTGGCCT CCAGCGTGGA CCAGCACGTC
CGGTTCGGCG GCGTGGTGCC CGAGGTGGCA AGCCGCGCGC ACCTGGAGGC GATGACCCCG
ACCGTGCACC GGGCGCTGGA AAAGGCCGGG GCCAAGCTGT CGGACGTGGA CGCCATCGCC
GTCACCGCCG GTCCGGGCCT GGCGGGCGCC CTGCTCGTGG GCGTGTCCGC GGCCAAGGCG
TACGCGATGG CCCTGGGCAA GCCGCTCTAC GGCGTGAACC ACCTCGTGGG CCACGTGGCC
GTGGACCAGC TGGAGCACGG ACCGCTGCCC AAGCCCTCGA TCGCCCTGCT GGTGTCGGGC
GGCCACACCT CGCTGCTGCT GGTCAACGAC CTGGCCACCG AGGTGGTCTC GCTCGGCGAC
ACCGTGGACG ACGCCGCCGG TGAGGCCTAC GACAAGGTGG CGCGCCTGCT CGACCTGCCC
TACCCGGGCG GCCCGCCCAT CGACAAGGCG GCGCAGCGGG GCGACCCCAA GGCGATCCGC
TTCCCGCGCG GCAAGTGGGG CGACGGCACC TACGACTTCT CGTTCTCGGG CCTGAAGACC
GCCGTGGCCC GCCACGTGGA GGACACCGAC CGCCGGGGCG AGCCCCTGGT GGTCGCCGAC
ATCGCCGCCG CCTTCCAGGA GTCGGTGGTG GACGTGCTCA CCCGCAAGGC CGTGGACGCC
TGCGTGGAGC ACGGCGTGAG CACGCTGGTC ATCAGCGGGG GCGTGGCGGC GAACTCGGCG
CTGCGCGCGC TGGCCGAGGA GCGCTGCCGG GAGGCCGGCG TCGAACTGCG CGTCCCGCGC
CCGCGCCTGT GCACCGACAA CGGCGCGATG ATCGCCGCCT TGGGCGCCGA GGTCGTGGCG
GCGGGCCTGC CCGCGTCCAC GCTGGACCTG GCCACGGACA CCTCCCTGCC GGTGAGCTCC
CCGCTGGCGG TGTAG
|
|---|
| Protein sequence | MSDLPLVMGI ETSCDETGVA LVRGCELLGD AVASSVDQHV RFGGVVPEVA SRAHLEAMTP
TVHRALEKAG AKLSDVDAIA VTAGPGLAGA LLVGVSAAKA YAMALGKPLY GVNHLVGHVA
VDQLEHGPLP KPSIALLVSG GHTSLLLVND LATEVVSLGD TVDDAAGEAY DKVARLLDLP
YPGGPPIDKA AQRGDPKAIR FPRGKWGDGT YDFSFSGLKT AVARHVEDTD RRGEPLVVAD
IAAAFQESVV DVLTRKAVDA CVEHGVSTLV ISGGVAANSA LRALAEERCR EAGVELRVPR
PRLCTDNGAM IAALGAEVVA AGLPASTLDL ATDTSLPVSS PLAV
|
|---|
| |