Gene Ndas_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4038 
Symbol 
ID9247910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4830737 
End bp4831519 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003681941 
Protein GI297562967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCCG CGGAAGGTCA CGGCGGTGTC CGAGAGGTCA AGTCGGCGGC GCGCACCGTC 
GAACTCCTGG AGATCCTGGC GCGCTACCGG GACCCGGTCA CCCTGCGCAC CCTCTCGGAG
GAGATGGGCA TCCCCCGCAG CAGCCTGTAC GCGCTGGTGC AGACGCTCGT GAACCGGGGC
TGGGTCCGGT CCGACCCCAC CGGGGCCCTC TACGCGCTGG GCATCCGCGC GCTCTTCACC
GGGACCGGCT ACATCGACTC CGACGCCCGG GTGGCCCAGG CTCGCGGCCA CCTGGACTCC
CTCGCCGAGA AGCTGGGGGA GACCGTCCAC CTCGCCCGGC TCGACGGCGG CGACGTCGTC
TACCTGGCCA CCCAGGAGTC ACGGCACTAC CTGCGCCCCT TCAGCCGGGT GGGCCGACGG
CTGCCCGCGC ACAGCACCGC CCTGGGCAAG GCACTGCTGG CCGAGCGCGA GGACGAACAG
GTGCGCGACC TGCTGCCCGC CAAGCTGGAG GCGCTCACCG ACGAGACGAT CACCGACGTG
GACGCGCTCC TGGAGGACCT CGCGCTCATC CGCGAACGGG GCTACTCCAC GGACGACGGG
GAGAACGTCG TGGGCCTGCG GTGCGTGGCG GTGTCCCTGC GCTACGACAA CCCTGCCGTG
GACGCGCTGA GCTGCTCGGT CCCGACGCCC CGGTACACCG AGGAGGTGGC CGCGGCCGTG
TTGGAGGCGC TGATGGAGGC GCGGGCGATC CTGGAGCGCT ACTGGCCCCC GACCCTGGGG
TGA
 
Protein sequence
MSAAEGHGGV REVKSAARTV ELLEILARYR DPVTLRTLSE EMGIPRSSLY ALVQTLVNRG 
WVRSDPTGAL YALGIRALFT GTGYIDSDAR VAQARGHLDS LAEKLGETVH LARLDGGDVV
YLATQESRHY LRPFSRVGRR LPAHSTALGK ALLAEREDEQ VRDLLPAKLE ALTDETITDV
DALLEDLALI RERGYSTDDG ENVVGLRCVA VSLRYDNPAV DALSCSVPTP RYTEEVAAAV
LEALMEARAI LERYWPPTLG