Gene Ndas_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4021 
Symbol 
ID9247893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4811132 
End bp4812001 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content75% 
IMG OID 
Productmembrane-bound lytic murein transglycosylase B 
Protein accessionYP_003681924 
Protein GI297562950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0202993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGAAC GACGCACGTC CGGGGCCGAG GGGCGCCGGA GTCGTGGCCC GCTGGTCGCC 
GTCTGCGTGA CGCTGACGGT GTGCCTGCTG CTGACCGGTG GAGTGGTCGT CCTGGTCAAC
CGGATCTCCG ACGCGTTCAA CGAGTGGTCG CCGCCCAGCG CCTCGGGCGT CGAGCCGCCG
GCGGGCACGA TCCAGACCCC GCCCCACGAC GAGCTCACCG GCCCGCCGGA GCCCGCGGAC
GTGGCCCCGG AGGAGGGCGA CCCCGCCCCC GAGGAGGCGG GCGCCGACGA GCGCCAGACC
CCCGCCGTCG AGGAGCGCCC CAGCGCCGAG TGGCTCGACC AGGTGTCGGA GGCGACCGGG
ATCCCGCGCC GGGCCCTGGA GGGGTACGCG GGCGCGCAGC TGGTGGTCGC CCGGGACCAG
CCCTCGTGCC AGCTGTCCTG GCCCACCCTG GCCGGGATCG GCTACATCGA GTCGCACCAC
GGCACCTACG CCGGGGGAGA GATCGGCGAC GACGGCAACA CGACCGTCGA CATCATCGGC
ATCCCGCTGG ACGGCACCAA CCGGACCCGG GCCATCCCGG ACACCGACGG CGGCCGGTAC
GACGGCGACA CCGAGTGGGA CCGGGCGATC GGCCCGATGC AGTTCATCCC GCACACCTGG
GAGCGCTGGG GCGACTCCCC GTCCGGTGGC GACCCCGACC CGCACAACAT CGACGACGCC
GCGCTCGCCG CGGCCCGGTA CCTGTGCGCG GAGGGCCGCG ACCTGACCGT CGCGGCCGAC
TGGGAGGCGG CGATCCTGGA GTACAACCGC TCCGACGAGT ACGTCGCCGA CGTCCTGGCC
TACGCGCACG CCTACGCCGA CGCGGCCTGA
 
Protein sequence
MGERRTSGAE GRRSRGPLVA VCVTLTVCLL LTGGVVVLVN RISDAFNEWS PPSASGVEPP 
AGTIQTPPHD ELTGPPEPAD VAPEEGDPAP EEAGADERQT PAVEERPSAE WLDQVSEATG
IPRRALEGYA GAQLVVARDQ PSCQLSWPTL AGIGYIESHH GTYAGGEIGD DGNTTVDIIG
IPLDGTNRTR AIPDTDGGRY DGDTEWDRAI GPMQFIPHTW ERWGDSPSGG DPDPHNIDDA
ALAAARYLCA EGRDLTVAAD WEAAILEYNR SDEYVADVLA YAHAYADAA