Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4009 |
Symbol | |
ID | 9247881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4795551 |
End bp | 4796246 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003681912 |
Protein GI | 297562938 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0669057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.324745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCGCG TGGGGCTGGC CGACGACCAG GTGCTGTTCA CGGCGGGCAT GGCGATGGTC ATCGACTCCC AGCCGGACCT GACCGTGGCC TGGGAGGCGG GCGACGGGGC CCAGGCCCTC GCCAGGCAGC ACTCCGACCC CGTCGACGTC CTGCTCATGG ACGTCCAGAT GCCCGGTACG GACGGGCTGA GCGCCACGCG CTCCCTCGTC TCCTCCGGGG CGGACTGCCG CGTCGTCATC CTCACCACCT TCGACACCGA CGAGTACGTG GTCGAGGGGG TGGAGGCCGG GGCCGCGGGC TTCCTGCTCA AGAACACCCC GCCCGAGGAG CTGCTGGAGG CCGTGCGGAC CGTGCACCGG GGCGACTCCG TCATCTCGGC CAGCTCCACG CGCAGACTGC TCGGGCACGT GCGCCCGCTG CTGGGCGGCC CGTCCTCCCG CCCGGTCCCG ATCGACGGGG ACACCCGCCG CGCCGTCGCC TCGCTGACCC CGCGCGAGCA GGAGGTCCTC GTCGCCGTGG CGCTGGGGTA CACGAACACG GAGATCTGCG AGCGCCTCGT GCTGTCCATG CCCACGGTCA AGACCCACGT CGGCCACGTC CTGGCCAAGA CCGGCTCCCG CGACCGGGTG CAGGCCGTGC TGTTCGCGTT CCGCGCCGGG CTGGTGGGCC GCGAGGACCT GCTCCGGGAG GCGTGA
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Protein sequence | MIRVGLADDQ VLFTAGMAMV IDSQPDLTVA WEAGDGAQAL ARQHSDPVDV LLMDVQMPGT DGLSATRSLV SSGADCRVVI LTTFDTDEYV VEGVEAGAAG FLLKNTPPEE LLEAVRTVHR GDSVISASST RRLLGHVRPL LGGPSSRPVP IDGDTRRAVA SLTPREQEVL VAVALGYTNT EICERLVLSM PTVKTHVGHV LAKTGSRDRV QAVLFAFRAG LVGREDLLRE A
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