Gene Ndas_4009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4009 
Symbol 
ID9247881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4795551 
End bp4796246 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content73% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003681912 
Protein GI297562938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0669057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.324745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCG TGGGGCTGGC CGACGACCAG GTGCTGTTCA CGGCGGGCAT GGCGATGGTC 
ATCGACTCCC AGCCGGACCT GACCGTGGCC TGGGAGGCGG GCGACGGGGC CCAGGCCCTC
GCCAGGCAGC ACTCCGACCC CGTCGACGTC CTGCTCATGG ACGTCCAGAT GCCCGGTACG
GACGGGCTGA GCGCCACGCG CTCCCTCGTC TCCTCCGGGG CGGACTGCCG CGTCGTCATC
CTCACCACCT TCGACACCGA CGAGTACGTG GTCGAGGGGG TGGAGGCCGG GGCCGCGGGC
TTCCTGCTCA AGAACACCCC GCCCGAGGAG CTGCTGGAGG CCGTGCGGAC CGTGCACCGG
GGCGACTCCG TCATCTCGGC CAGCTCCACG CGCAGACTGC TCGGGCACGT GCGCCCGCTG
CTGGGCGGCC CGTCCTCCCG CCCGGTCCCG ATCGACGGGG ACACCCGCCG CGCCGTCGCC
TCGCTGACCC CGCGCGAGCA GGAGGTCCTC GTCGCCGTGG CGCTGGGGTA CACGAACACG
GAGATCTGCG AGCGCCTCGT GCTGTCCATG CCCACGGTCA AGACCCACGT CGGCCACGTC
CTGGCCAAGA CCGGCTCCCG CGACCGGGTG CAGGCCGTGC TGTTCGCGTT CCGCGCCGGG
CTGGTGGGCC GCGAGGACCT GCTCCGGGAG GCGTGA
 
Protein sequence
MIRVGLADDQ VLFTAGMAMV IDSQPDLTVA WEAGDGAQAL ARQHSDPVDV LLMDVQMPGT 
DGLSATRSLV SSGADCRVVI LTTFDTDEYV VEGVEAGAAG FLLKNTPPEE LLEAVRTVHR
GDSVISASST RRLLGHVRPL LGGPSSRPVP IDGDTRRAVA SLTPREQEVL VAVALGYTNT
EICERLVLSM PTVKTHVGHV LAKTGSRDRV QAVLFAFRAG LVGREDLLRE A