| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4008 |
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| Symbol | |
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| ID | 9247880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 4793980 |
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| End bp | 4795554 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_003681911 |
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| Protein GI | 297562937 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00577691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.384071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGGC ACGAGGCCCT CCGGCCCGCG CGTTCCTATC CTGGGGGAAT GCCCGACCTG
TCCCCACGCT CCCTCCTGGA CCGCGTGACG CTGTGGGCCC GCGGCCACGT GCTCGCCGTG
GACGCGCTCT GGGCCGTCGT CTGGTTCGCC ATGTCGATGG CGACCTGGCC GAGGGCCAGC
TTCGACACCG CCGAGTCGTG GGTCTACCTC GTGCTGGCCA CCGCGTGCTG CGCCGCCCTG
GCCCTGCGCC GCGTCCGCCC GTTCGCGTGC CTCGCGGTGC TGGGCGTCCT GCTGGCGTTC
CACATCCTCT GGTTCGACCA GCCCACGGCC CCGGTGGGCA TCTGCGCCCT GGTCGCGTCC
TACACGGCGC AGGCCGAGCT CCCGCGCCCG TGGCGCGCCG TCGGTCTCCT CCTGCTCCTG
GCCGGAGCGG CCTGGGCCGT CCTCTCCATC CCGCCGGAGA ACCTCTCCGC GGACCTGGAG
CTGCGCCTCA ACAGCGTCGT CTCGGCGTGG ACGGCGGTCG CGCTGTTCTC CCTGCTCGGA
GCGTTCCGCA GGCGCAACCG CGAGGAGTTC GCCCGCGTCG TGGAGCACGC CCGGCTGCTG
GAGACCCAGC GGGAGCAGGA GGTGCGCCTG GCCGCGCTCG ACGAGCGGAC GCGCATCGCC
CGGGAGATGC ACGACATCCT CGCGCACTCG CTGAACGTCA TCGTCGCCCA GGCCGACGGC
GGCCGCTACG CCGCGAAGGC CGCCCCGGAG CGCGCGGTGG CCGCCCTGGC CACCGTCGCC
CAGGTGGGAC GCGAGTCGGC GGCGGAACTG CACCAGCTCC TGGGCGTCCT GCGCGACGGC
GAGGAGCGCG GGGCCGCCCC GGCCCCCGGG GTCGGCGACC TGCCCGGCCT CGTGGAGGAG
TACCGCCGCG CCGGTCTGCG GATCCGCCTG GTCCAGCACG GGTCCCCGGC CGCCCCGCGC
GGCGGCCGGG CGGACACCGG CGCCCCGGCG ACCCTGCCGG CGACCGCGTC CCTGACGGTC
TACCGCGTGG TGCAGGAGTC GCTGGCCAAC GCGCTCAAGC ACGGGGGACC CGCCGCCGCG
CGGGTCGAGC TGACGTGGTC GCCCGGGCGG GTCGGGATCG ACGTGGCCAA CTCCGTCCGC
GAGGCCGCAC CCGCGGCCCT CACCACACCC GCGGGCCCCT CAGGCCGCTC GGAATCCACA
GGTCCGTCCG CGTCTGGAGG CCCCTCGGCT CCCCCGGTGT TCGCGGGCCC CTCCATGCCC
ACGGCCCTCT CCGCACCCGA GGGGGTTCCT CCCACGGGCC GCTCGGGTCC ATCGACACCC
GCGGACGCCT CGGGCCCCTC GGCGCCCGCG GGTTCCTGCG GCACCGGAAG GCCCTCCGGT
ACCGGGAGGC ACTCCGCCGC CAAGGCGCCC TCCGCCGTCG GGGCGGTCCC GGGCGGCGCT
CGGCGGGGCC CCGGCCACGG CCTGGTCGGC ATGCGCGAGC GTGTGGGCCT GCACGGCGGC
ACCCTGGAGG TCGGCGCCGA CGACGCCACC GGCACCTGGC GGGTGCGCGC GGTGGTCCCC
TGGGAGGAGG CGTGA
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| Protein sequence | MPWHEALRPA RSYPGGMPDL SPRSLLDRVT LWARGHVLAV DALWAVVWFA MSMATWPRAS
FDTAESWVYL VLATACCAAL ALRRVRPFAC LAVLGVLLAF HILWFDQPTA PVGICALVAS
YTAQAELPRP WRAVGLLLLL AGAAWAVLSI PPENLSADLE LRLNSVVSAW TAVALFSLLG
AFRRRNREEF ARVVEHARLL ETQREQEVRL AALDERTRIA REMHDILAHS LNVIVAQADG
GRYAAKAAPE RAVAALATVA QVGRESAAEL HQLLGVLRDG EERGAAPAPG VGDLPGLVEE
YRRAGLRIRL VQHGSPAAPR GGRADTGAPA TLPATASLTV YRVVQESLAN ALKHGGPAAA
RVELTWSPGR VGIDVANSVR EAAPAALTTP AGPSGRSEST GPSASGGPSA PPVFAGPSMP
TALSAPEGVP PTGRSGPSTP ADASGPSAPA GSCGTGRPSG TGRHSAAKAP SAVGAVPGGA
RRGPGHGLVG MRERVGLHGG TLEVGADDAT GTWRVRAVVP WEEA
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