Gene Ndas_4007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4007 
Symbol 
ID9247879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp4792810 
End bp4793823 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content73% 
IMG OID 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_003681910 
Protein GI297562936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.006628 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.348015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAC TGCTCACCGG CGGTGCCGGG TACATCGGCT CCCACACGGC GGTCGAACTC 
CTCGAAGCCG GGCACGAGGT CGTGGTCGTG GACCTCCTCT CCAACAGCCA CGAGGAGGCC 
CTGCGCCGCG TCGAGCGCAT CACCGGGCGC GCCGTCGCCT TCCACCGGGC CGACTGCGCC 
GACCCCGAGG CGATGCGCCG GGTCTTCGCC GAGCACCGCG TCGACGCCGT CATCCACATG 
GCCGGGCTCA AGGCCGTGGG GGAGTCGGTG GAGCAGCCGC TGCGCTACTA CCGCAACAAC 
ATGGACGCCC TGTTCACGCT CATCGAGGTC ATGGACGAGC ACGGCGTGCG CGACCTGGTG 
TTCAGCTCCT CGGCCACCGT CTACGGCGAC CCCGAGCAGG TGCCGATCAC CGAGGACAGC 
GCCCTGTCCG CCACCAACCC CTACGGCGCC ACCAAGCTGT TCGCCGAGCG CGTCCTCCAG 
GACACGGCCG CCGCCGACCC GCGCTGGCGG ATCACCGCCC TGCGCTACTT CAACCCCATC 
GGCGCCCACC CCAGCGGCCT GATCGGCGAG GACCCCCAGG GCGTTCCCAA CAACCTCTTC 
CCCTACGTCG CGCAGGTCGC CGCGGGCCGC CGCGAGCGGC TGAACGTGTT CGGCGACGAC 
TACGACACCC CCGACGGCAC CGGCGTGCGC GACTACCTGC ACGTGGTGGA CCTGGCCCAG 
GGGCACATGG CCGCCGTGGA GCACCTCGCC GACGCTCCCG GGTACCGCGT CTACAACCTG 
GGCACGGGGC AGGGCACCTC CGTCCTGGAG GGCCTGCGCG CCTTCGAACG CGCCACCGGC 
GTGGCCGTCC CGTACGCCGT GGTCGACCGC CGCCCCGGCG ACATCGCCGT GTGCTACGCC 
GACCCCTCGG CCGCCGCACG CGACCTGGGC TGGAAGGCCG TGCGCACGGT GGACGACGCC 
TGCCGCGACG CGTGGCGCTG GCAGTCGGCC AACCCCGCGG GCTTCACCGC CTGA
 
Protein sequence
MNVLLTGGAG YIGSHTAVEL LEAGHEVVVV DLLSNSHEEA LRRVERITGR AVAFHRADCA 
DPEAMRRVFA EHRVDAVIHM AGLKAVGESV EQPLRYYRNN MDALFTLIEV MDEHGVRDLV 
FSSSATVYGD PEQVPITEDS ALSATNPYGA TKLFAERVLQ DTAAADPRWR ITALRYFNPI 
GAHPSGLIGE DPQGVPNNLF PYVAQVAAGR RERLNVFGDD YDTPDGTGVR DYLHVVDLAQ 
GHMAAVEHLA DAPGYRVYNL GTGQGTSVLE GLRAFERATG VAVPYAVVDR RPGDIAVCYA 
DPSAAARDLG WKAVRTVDDA CRDAWRWQSA NPAGFTA