Gene Ndas_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3931 
Symbol 
ID9247802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4703331 
End bp4704092 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003681834 
Protein GI297562860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAC CCCCTTTTCC CGATGTGCTC ACCAAGTTCC GAGAGCTGAA CGGGCTTTCC 
CAGAAGCAAC TCGCGCACCG TGTCCACACG TCCGTGGCCT CGGCTTCCCG ATGGACGAAT
GGGCATGCAC TACCGCAACT GCCCATGGCG GAAAAACTGG ACGCCGAGCT GAAAGCGAAC
GGAAAGCTGC TGGCCGCGTG GCGTGAGGCG ACCACAGGTA CGACACTTCC GGAGTGGGTG
CGCTCGATTG CGGACATCGA GATGGAAGCG CGAACTGTTC AGGTTGTGAT GCCCGTACTC
GTACCGGGAT ACCTCCAGAG CCCGTCGTAC GCGTCGTTGC TCTTCCGGTC CGGCTGGCCC
TTCGCCTCTG ACGAGGAGAT TGCCCGGCTC ACCAAGGTTC GTATGGAGGT GTTCGGCCGG
TTGCCCCGAC TTCGAGTGAC AGCGGTGTTC CCGGTGACGG CGTTGACCGG AGTGGACGAG
GCGGTACGAC GGGAACAGGC CGCTCATCTG TTGGACCTGA TCGGCTCGGG TCGGGTGGTG
GTGCACCTGG TTCCGGAGGG CTCGATGCTG ATGGAGCCCC CCACACCGAT GATGGCGTTC
CGGCTGCGCT CGGGGGAAGC GGTGATCACG AGCGACAACC CAGATGGAAA TGTCATTCAC
GCGGCCCACA TGCACGAGCG GTTGCACGCA CTCATCACGG GGGCACTCGC GGTGGCGCTT
CCCGCTCGAC ACTCACTCGA AGTACTCAGG GAATTGGCAT GA
 
Protein sequence
MAEPPFPDVL TKFRELNGLS QKQLAHRVHT SVASASRWTN GHALPQLPMA EKLDAELKAN 
GKLLAAWREA TTGTTLPEWV RSIADIEMEA RTVQVVMPVL VPGYLQSPSY ASLLFRSGWP
FASDEEIARL TKVRMEVFGR LPRLRVTAVF PVTALTGVDE AVRREQAAHL LDLIGSGRVV
VHLVPEGSML MEPPTPMMAF RLRSGEAVIT SDNPDGNVIH AAHMHERLHA LITGALAVAL
PARHSLEVLR ELA