Gene Ndas_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3887 
Symbol 
ID9247758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp4658699 
End bp4659838 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content71% 
IMG OID 
ProductATPase-like, ParA/MinD 
Protein accessionYP_003681790 
Protein GI297562816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.803314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCA CACCATCCAC CGAGCAGGTG CACAAAGCCC TAGCCACGGT GCAAGACCCG 
GAGATCCACC GCCCCATCAC CGATCTCGGC ATGGTCAAGA GCGTCGACGT CGCCGACGAC 
GGTGCCGTGA GCGTCGGCGT CTACCTCACG GTGGCCGGAT GCCCGATGAA GGGCCGTATC 
GAGAAGGACG TGACCGCCGC GGTGACCAAG GTCGCCGGGG TCACCTCCGT GCGCGTCGAG 
CTCGACGTGA TGAGCGACGA GCAGCGCAAG GAACTCCAGA CCAAGCTGCG CGGCGGCCAG 
GCGGAGAAGG AGATCCCCTT CGCCAAGCCG AACTCGCTCA CCCGCGTCTT CGCCGTCGCC 
TCCGGCAAGG GCGGTGTCGG CAAGTCCTCC GTCACCGTGA ACCTGGCCGC GGCCATGGCC 
GCCCAGGGCC ACAAGGTGGG CGTCGTGGAC GCCGACATCT ACGGCCACTC GGTGCCCCGC 
ATGCTCGGCG CGTCGGACTT CCCGACCAAG GTCGAGGACA TGATCCTGCC GCCCACCGCG 
CATGACATCA AGGTCATCTC GGTCGGCATG TTCACGCAGG GCAACCAGCC GGTGGTGTGG 
CGGGGCCCGA TGCTGCACCG CGCCCTCCAG CAGTTCCTGT CGGACGTGTT CTGGGGCGAC 
CTGGACGTGC TGCTGATGGA CCTGCCCCCG GGCACCGGCG ACATCGCCAT CTCCACCGCG 
CAGCTGCTGC CCAACGCCGA GCTGCTCGTG GTGACCACCC CGCAGCAGGC CGCCGCCGAG 
GTCGCCGAGC GCGCGGGCGC CATCACCGCC CAGACCCACC AGCGGATCGC CGGCGTGATC 
GAGAACATGT CGTACTACCT GCCGCCGGAC GGCGGGGAGC CGATCCACCT GTTCGGCGAG 
GGCGGCGGGC GCACGGTCGC CGACGCCCTC ACCCGGACGC TGGGCACCGA CATCCCGCTG 
CTGGGCCAGG TGCCGCTGGA CACCCGCCTG CGCGAGGGCG GCGACGAGGG CAAGCCCCTG 
GTGCTGACCG AGCCCGAGGC CGAGGCCAGC AAGGTGATCG CCTCGATCGC CGAGACCCTG 
GTCGGCAAGC CCCGCGGACT GGCCGGTATG CAGCTGGGCA TCTCCCCGGC GGGCCGCTAG
 
Protein sequence
MSSTPSTEQV HKALATVQDP EIHRPITDLG MVKSVDVADD GAVSVGVYLT VAGCPMKGRI 
EKDVTAAVTK VAGVTSVRVE LDVMSDEQRK ELQTKLRGGQ AEKEIPFAKP NSLTRVFAVA 
SGKGGVGKSS VTVNLAAAMA AQGHKVGVVD ADIYGHSVPR MLGASDFPTK VEDMILPPTA 
HDIKVISVGM FTQGNQPVVW RGPMLHRALQ QFLSDVFWGD LDVLLMDLPP GTGDIAISTA 
QLLPNAELLV VTTPQQAAAE VAERAGAITA QTHQRIAGVI ENMSYYLPPD GGEPIHLFGE 
GGGRTVADAL TRTLGTDIPL LGQVPLDTRL REGGDEGKPL VLTEPEAEAS KVIASIAETL 
VGKPRGLAGM QLGISPAGR