| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3884 |
|---|
| Symbol | |
|---|
| ID | 9247755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4655270 |
|---|
| End bp | 4656427 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
|---|
| Protein accession | YP_003681787 |
|---|
| Protein GI | 297562813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.964763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGC GTAACCGCAC CGTCCCGCGC GTGGGAATGG TGGGAGGGGG CCAACTCTCC
CGGATGACCC ACCAGGCGGG CATCGCCCTG GGGGTCGACT TCTCGGTCCT GGCGTCCAGC
CCCGCCGACA GCGCCGCGCT GGTGTGCGGT GACGTCTCCC TGGGCGACGA CCGCGGCCTC
GACGACGTCC TGGCCTTCGC CAAGGCCCAC GACGTGGTCA CCTTCGACCA CGAGCACGTG
CCCGAGCCCG TCCTGCGCGC GGTCGAGGAG GCCGGGGGCC TGCTGCGCCC CGGCCGCGAC
GCGCTGCGCT TCGCCCAGGA CAAACTGCGC ATGCGCACCC GTATGGCCGA GCTGGGCGCG
CCCTCGCCGC GCTGGCGTGC CGTCACCACC CTGGAGCACG TCACGGCCTT CGCCGGGGAG
ACCGGGTGGC CGGTCGTGCT CAAGGCGGCC CGCGGCGGCT ACGACGGCAA GGGCGTGTGG
GTCGTCGGTG ACGCCGACGA GGCCCGCGGG GTCGTGGACC GCGCCGCCGC CGAGGAGGTG
CCGCTCCTGG TCGAGGGGAA GGTGGACTTC TCGCGCGAGC TGGCCGTGCA GGTCGCCCGC
TCCCCGCACG GGCAGGTCGC GGTCTACCCG GTCGTGGAGA CCGTGCAGCG CGGCGGCATC
TGCCACGAGG TGATCGCCCC CGCCCCGGAC CTGTCCGAGG ACAAGGCCAC CCACGCCCAG
CAGCTGGCCA TCGAGATCGC CCAGGCGCTG GACGTGACCG GGGTCCTGGC CGTGGAGCTG
TTCGAGACCG CCGACGGCGT GGTCGTCAAC GAGCTGGCCA TGCGCCCGCA CAACTCCGGC
CACTGGAGCA TCGAGGGCGC GCGCACCTCC CAGTTCGAGC AGCACCTGAG GGCCGTGCTG
AACCTGCCGC TGGGCTCGCC GCGCACCAAC GCGCCCTACA CCGTCATGGC CAACCTGCTG
GGCGGCGAGG ACCCCGAGGT CTACCGCCGC TACCTGCACG TGATGGCGAA GGACCCCGAG
GTGAAGGTGC ACTTCTACGG CAAGGACGTG CGTCCGGGCC GCAAGATCGG GCACGTCACC
GTGATGGGTG AGGACTACCG TGACCTGCTG GCGCGCGCGC GAGACGCCGC CGCCTACCTG
CGAGGAGACG AACAGTGA
|
|---|
| Protein sequence | MSERNRTVPR VGMVGGGQLS RMTHQAGIAL GVDFSVLASS PADSAALVCG DVSLGDDRGL
DDVLAFAKAH DVVTFDHEHV PEPVLRAVEE AGGLLRPGRD ALRFAQDKLR MRTRMAELGA
PSPRWRAVTT LEHVTAFAGE TGWPVVLKAA RGGYDGKGVW VVGDADEARG VVDRAAAEEV
PLLVEGKVDF SRELAVQVAR SPHGQVAVYP VVETVQRGGI CHEVIAPAPD LSEDKATHAQ
QLAIEIAQAL DVTGVLAVEL FETADGVVVN ELAMRPHNSG HWSIEGARTS QFEQHLRAVL
NLPLGSPRTN APYTVMANLL GGEDPEVYRR YLHVMAKDPE VKVHFYGKDV RPGRKIGHVT
VMGEDYRDLL ARARDAAAYL RGDEQ
|
|---|
| |