Gene Ndas_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3871 
Symbol 
ID9247742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp4641699 
End bp4642535 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003681774 
Protein GI297562800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGTCAA GGGCGCTGGC CGTCTGGGAG CACCGGAAGG TCGTCGGCCT CCTGGTCCGG 
CGCGACCTGA AGGTCAAGTA CCAGCAGTCC GTACTGGGGT ACGCGTGGAC GATGTTGGAG 
CCGCTGGCTC TGACGATGGT CTACTTCGTC GTCTTCGGCG TCATCCTCAA CGCGGAACGG 
GGCATGCCGG AGGAGGCCCT GGCGCAGGGC GGTTTCCTGC TGTTCCTCGT GGCGGGGATC 
CTGCCCTGGA ACACCTTCGG GGCGATCCTG TCCGAGGCCC CCCGCGCGAT GATCACGCAC 
GCCAAGCTGA TCACCACCAT GAAGGTGCCG CGGGAGATCT TCCCCACGGC CACGGTCGGC 
ACGAAGTTCA TCGAGTACCT GCTCACCTGG CCCGTGCTGA TCCTCTTCGT GATCTTCCTC 
GGGGGCAGGC CCTCGTGGGA GGGCGTGCTG GTGTGGCTGC CGCTGGCCGT CGTGCTCCAG 
TTCGTCTTCG GGCTGGGCCT CACCCTCTTC CTGTCCGCGG TCAACGTGCT GCTGCGCGAC 
GTCGAGCGCC TGGTGCGCAT CGCCTCCCGC CTGCTGTTCT ACGGCTCGGC GGTCCTGTTC 
CCCGCCTCGC TGGTGCTCAC CGAGCCCAGC GTTCCGGAGT GGGCGAAGAC ACTTTTCCAG 
CTCAACCCGC TGCTGGGTAT CTTCGAGATG CACCGTGCCG TGTGGTTCGC CGGATTCGAC 
GAACTCACCC CGAGCACCCT CGCGTTGACC TCGTCGGTGG TCGGTTCGAT TCTCATGCTG 
ATCATCGGAT ACTGGACGTT CCGCCGTCTG GAGATGTCCG TCCTGAAGGA GCTGTGA
 
Protein sequence
MASRALAVWE HRKVVGLLVR RDLKVKYQQS VLGYAWTMLE PLALTMVYFV VFGVILNAER 
GMPEEALAQG GFLLFLVAGI LPWNTFGAIL SEAPRAMITH AKLITTMKVP REIFPTATVG 
TKFIEYLLTW PVLILFVIFL GGRPSWEGVL VWLPLAVVLQ FVFGLGLTLF LSAVNVLLRD 
VERLVRIASR LLFYGSAVLF PASLVLTEPS VPEWAKTLFQ LNPLLGIFEM HRAVWFAGFD 
ELTPSTLALT SSVVGSILML IIGYWTFRRL EMSVLKEL