| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3866 |
|---|
| Symbol | |
|---|
| ID | 9247737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4637062 |
|---|
| End bp | 4638129 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_003681769 |
|---|
| Protein GI | 297562795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.948172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTAC TAGCCCGCAT GCTCCCCTCC CCGCTGGCGA TCGACGTGCG CCGGGGAGCC
GTCTCCTCCC TCGGGACGCT GCTCGCCGAC CGCAGGATCG CCACCGAGGG CCGCATCGCC
GTGGCCGTCG GCCCGGGGCA GGGGGCGCAG ATCGCCTCCG AGCTGGACCT GCCCAACTGC
GAGGTCTTCC ACGTCGAGGA GGGCACCGTC GACGCCGCGA CCGAGCTGGG AAAGAAGCTC
CGCTCGGGCG CCTACGAGGC GGTCGCCGGG ATCGGCGGCG GCAAGACCAT CGACGTGACC
AAGTTCGCCG CCACCATGGC GGGGATCCCC ATGGTGGCCG TGGCCACCAA CCTCGCGCAC
GACGGCATCG CCTCGCCGGT CAGCTCGCTG GAGCACGAGG GCGGCAAGCC CTCCATCGGC
GTGACCATGC CCATCGCCGT GGTCATCGAC GTCGACTACG TCCGGGCGGC CCCCTCGCAC
CTGGTGCGCT CGGGCATCGG CGACGTGGTC AGCAACATCT CCGCCATCGA GGACTGGGAG
CTGGCGGGCC GGGTCAACGG CGAGCCGGTG GACGGCATGT CCGTCACCTT CGCCAGGGTC
GCGGCCGAGG CGGTCCTGCA CCGCCCGGAC TCGGTGGAGT CCGAGGCCTT CCTCACGGTG
CTGGCCGAGG GCCTGGTGCT CTCGGGGATG GCGATGTCGG TGGCCGGGTC CAGCCGCCCC
GCCAGCGGCG CGTGCCACGA GATCCTGCAC GCGGTCACCC AGCTCCACCC GGGCACCAGC
AACCACGGCG AGCTCGCCGG GCTGGGCGCG CTGTACGCGT CCTTCCTGCG GGTGCGGCAC
CTGGACTGGT CGCAGGCGCG GATGAACGAG ATCCGCGACT GCCTGATCCG TCACGAGCTG
CCCGTCGTGC CCTCCGACGT CGGACTCGAC GAGGCGGAGT TCGCACGGGC GGTGGTCCAC
GCCCCGGACA CCCGTCCGGG CCGGTTCACC ATCCTGGAAC ACCTGAACCT CTCCGAGGAC
GAGATCGGAC GGAGCGTCAA GGACTATGTC GAAGCCGTCG GTCGCTGA
|
|---|
| Protein sequence | MPLLARMLPS PLAIDVRRGA VSSLGTLLAD RRIATEGRIA VAVGPGQGAQ IASELDLPNC
EVFHVEEGTV DAATELGKKL RSGAYEAVAG IGGGKTIDVT KFAATMAGIP MVAVATNLAH
DGIASPVSSL EHEGGKPSIG VTMPIAVVID VDYVRAAPSH LVRSGIGDVV SNISAIEDWE
LAGRVNGEPV DGMSVTFARV AAEAVLHRPD SVESEAFLTV LAEGLVLSGM AMSVAGSSRP
ASGACHEILH AVTQLHPGTS NHGELAGLGA LYASFLRVRH LDWSQARMNE IRDCLIRHEL
PVVPSDVGLD EAEFARAVVH APDTRPGRFT ILEHLNLSED EIGRSVKDYV EAVGR
|
|---|
| |