Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3839 |
Symbol | |
ID | 9247710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4604627 |
End bp | 4606879 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | helicase, RecD/TraA family |
Protein accession | YP_003681742 |
Protein GI | 297562768 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0839164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGACG CGACCTTCCG ACCAGCCGTC GTCCAGGGCG TCCTGGAGCG GGTCACCTAC GCCAACGAGG AGAACGGCTA CACCGTCGCC AAGGTCGACA CGGGCCGGGG CGCGCACGAC CTCCTCACCG TCGTGGGCTC CCTCATGGGA GTCCAGCCCG GCGAGGCGCT GCGCATGCGC GGCCGCTGGG GCTCCCACCC GCAGTACGGC CGCCAGTTCC ACGTGGACGA CTACACGACC GTCCTGCCCG CCACGGTCCA GGGCATCCGC CGCTACCTCG GCTCCGGCCT GATCAAGGGG ATCGGCCCCA AGATGGCCGA GCGGATCGTC GACCACTTCG GCACCGACGC CCTGGAGGTC ATCGAGGAGC ATCCGGAACG GCTCATCGAG GTCCCGGGCC TGGGGCCCAA GCGCACCCGG CTCATCGCCG ACGCCTGGGA GGAGCAGAAG GCCATCAAGG AGGTGATGGT CTTCCTCCAG GGCGTGGAGG TCACCACCTC CCTGGCCGTG CGCATCTACA AGAAGTACGG CGACGCCTCC ATCCAGATCG TGCAGAAGGA GCCCTACCGC CTGGCCACCG ACGTGTGGGG GATCGGCTTC AAGACCGCCG ACACCATCGC CCGAGCGGTC GGCATCCCGC ACGACAGCCC GCAGCGGGTC ATGGCGGGTA TCCAGTTCAC CCTCTCGGAG TCCACCGGCG ACGGGCACGT CTACCTGCCC GAGGAGAAGC TCATCTCGGC GGCCGTGAAG ATCCTCCAGG TGGAGGCCGG GCTGGTGATC GAGTGCGTGG CCGAACTCGT GGCCACCGAG GGCGTGGTGC GCGAGACCGT GCCCGGGCCC GAGGGCGAGC CGGTGCGCGC CGTCTACCTG CTGCCCATGC ACCGCGCCGA GATCGGTCTC GCCTCCGGCC TGCGCGGCCT GCTCCACGCC CCGGCCGACC GCATGCCCGC GTTCGCCGGG GTGGACTGGG ACGTGGCCCT GGACTGGCTG CGCTCGCGCA CGCGCGCCGA CCTCGCCGAG GCCCAGAGGG AGGCCGTGCG GCTGGCCCTG TCGGAGAAGG TGTGCGTGCT CACCGGCGGG CCCGGCTGCG GCAAGTCCTT CACGGTCGCC TCCATCGTCA CCCTGGCCAT GGCCAAGCGC GCCACGATCG TCCTGGCCGC GCCCACCGGG CGCGCCGCCA AGCGCCTCAC CGAGATGACC GGCATCGAGG CCCGCACGGT GCACCGGCTC CTCGAACTCC GCCCGGGCGG CGACGCCGCC TACGACCGGG ACAACCCCCT CGACTGCGAC CTGCTGGTGG TGGACGAGGC CTCCATGCTG GACGTGATCC TGGCCAACAA GCTGGTCAAG GCGGTCCCGC CCGGGGCGCA CCTGCTGTTC GTCGGCGACG TGGACCAGCT GCCCTCCGTG GGCGCGGGCC AGGTGCTGCG CGACCTGCTG GACGGGGACT CGCCCGTGCC GAGCGTGCGA CTGACCCACG TCTTCCGCCA GGCCCAGAAC TCCGGGGTGA TCACCAACGC CCACCGGATC AACGGCGGCG AGCCGCCGGA GTTCCACGGT ATGTCCGACT TCTTCCTCTT CCCCTGCGAG GAGTCCGAGG ACGCGGCCGA GATGACCGTG GACGTGGTCG CCCGCCGCAT CCCGCGCCGG TTCGGCCTCG ACCCGCGCCG GGACGTCCAG GTCCTCACCC CCATGAAGGG CGGCCCGGCC GGGGCGGCCA ACCTCAACAC GGCCCTCCAG GCCGCCGTGA CGCCCTCCGG CGAGCACGTC CCCGAACGCC GGTTCGGCGG GCGCGTCTTC CGCGTCGGAG ACAAGGTCAC CCAGGTCCGC AACAACTACG ACAAGGGCGA GAACGGGGTG TTCAACGGAA CGCTCGGCGT GGTCACGGGG CTCGACGAGG TCGCCCAGGA GGTCCTGGTC CGCACCGACG AGGACGAGGA GATCGCCTAC GACTTCGCCG AACTCGACGA GCTCGCCCAC GCCTACGCCA TCACCGTGCA CCGCTCCCAG GGCAGCGAGT ACCCCGCGGT GGTCGTGCCG GTCACCACCA GCGCCTGGAT GATGCTCCAG CGCAACCTGC TCTACACGGC CGTCACGAGG GCCAAGAAGC TGGTGGTCCT GGTCGGCTCC CGCCGCGCCC TGGCCCAGGC GGTGCGCAAC GCCTCCTCCG GGCGCAGGCA CACGGCCCTG GCGCACCGGC TGCGGTCGGC CGGTCGGCCG CCGGAGGAGC CCCCGCCCCC GGACGCCCCC TGA
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Protein sequence | MPDATFRPAV VQGVLERVTY ANEENGYTVA KVDTGRGAHD LLTVVGSLMG VQPGEALRMR GRWGSHPQYG RQFHVDDYTT VLPATVQGIR RYLGSGLIKG IGPKMAERIV DHFGTDALEV IEEHPERLIE VPGLGPKRTR LIADAWEEQK AIKEVMVFLQ GVEVTTSLAV RIYKKYGDAS IQIVQKEPYR LATDVWGIGF KTADTIARAV GIPHDSPQRV MAGIQFTLSE STGDGHVYLP EEKLISAAVK ILQVEAGLVI ECVAELVATE GVVRETVPGP EGEPVRAVYL LPMHRAEIGL ASGLRGLLHA PADRMPAFAG VDWDVALDWL RSRTRADLAE AQREAVRLAL SEKVCVLTGG PGCGKSFTVA SIVTLAMAKR ATIVLAAPTG RAAKRLTEMT GIEARTVHRL LELRPGGDAA YDRDNPLDCD LLVVDEASML DVILANKLVK AVPPGAHLLF VGDVDQLPSV GAGQVLRDLL DGDSPVPSVR LTHVFRQAQN SGVITNAHRI NGGEPPEFHG MSDFFLFPCE ESEDAAEMTV DVVARRIPRR FGLDPRRDVQ VLTPMKGGPA GAANLNTALQ AAVTPSGEHV PERRFGGRVF RVGDKVTQVR NNYDKGENGV FNGTLGVVTG LDEVAQEVLV RTDEDEEIAY DFAELDELAH AYAITVHRSQ GSEYPAVVVP VTTSAWMMLQ RNLLYTAVTR AKKLVVLVGS RRALAQAVRN ASSGRRHTAL AHRLRSAGRP PEEPPPPDAP
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