Gene Ndas_3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3839 
Symbol 
ID9247710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4604627 
End bp4606879 
Gene Length2253 bp 
Protein Length750 aa 
Translation table11 
GC content72% 
IMG OID 
Producthelicase, RecD/TraA family 
Protein accessionYP_003681742 
Protein GI297562768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0839164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGACG CGACCTTCCG ACCAGCCGTC GTCCAGGGCG TCCTGGAGCG GGTCACCTAC 
GCCAACGAGG AGAACGGCTA CACCGTCGCC AAGGTCGACA CGGGCCGGGG CGCGCACGAC
CTCCTCACCG TCGTGGGCTC CCTCATGGGA GTCCAGCCCG GCGAGGCGCT GCGCATGCGC
GGCCGCTGGG GCTCCCACCC GCAGTACGGC CGCCAGTTCC ACGTGGACGA CTACACGACC
GTCCTGCCCG CCACGGTCCA GGGCATCCGC CGCTACCTCG GCTCCGGCCT GATCAAGGGG
ATCGGCCCCA AGATGGCCGA GCGGATCGTC GACCACTTCG GCACCGACGC CCTGGAGGTC
ATCGAGGAGC ATCCGGAACG GCTCATCGAG GTCCCGGGCC TGGGGCCCAA GCGCACCCGG
CTCATCGCCG ACGCCTGGGA GGAGCAGAAG GCCATCAAGG AGGTGATGGT CTTCCTCCAG
GGCGTGGAGG TCACCACCTC CCTGGCCGTG CGCATCTACA AGAAGTACGG CGACGCCTCC
ATCCAGATCG TGCAGAAGGA GCCCTACCGC CTGGCCACCG ACGTGTGGGG GATCGGCTTC
AAGACCGCCG ACACCATCGC CCGAGCGGTC GGCATCCCGC ACGACAGCCC GCAGCGGGTC
ATGGCGGGTA TCCAGTTCAC CCTCTCGGAG TCCACCGGCG ACGGGCACGT CTACCTGCCC
GAGGAGAAGC TCATCTCGGC GGCCGTGAAG ATCCTCCAGG TGGAGGCCGG GCTGGTGATC
GAGTGCGTGG CCGAACTCGT GGCCACCGAG GGCGTGGTGC GCGAGACCGT GCCCGGGCCC
GAGGGCGAGC CGGTGCGCGC CGTCTACCTG CTGCCCATGC ACCGCGCCGA GATCGGTCTC
GCCTCCGGCC TGCGCGGCCT GCTCCACGCC CCGGCCGACC GCATGCCCGC GTTCGCCGGG
GTGGACTGGG ACGTGGCCCT GGACTGGCTG CGCTCGCGCA CGCGCGCCGA CCTCGCCGAG
GCCCAGAGGG AGGCCGTGCG GCTGGCCCTG TCGGAGAAGG TGTGCGTGCT CACCGGCGGG
CCCGGCTGCG GCAAGTCCTT CACGGTCGCC TCCATCGTCA CCCTGGCCAT GGCCAAGCGC
GCCACGATCG TCCTGGCCGC GCCCACCGGG CGCGCCGCCA AGCGCCTCAC CGAGATGACC
GGCATCGAGG CCCGCACGGT GCACCGGCTC CTCGAACTCC GCCCGGGCGG CGACGCCGCC
TACGACCGGG ACAACCCCCT CGACTGCGAC CTGCTGGTGG TGGACGAGGC CTCCATGCTG
GACGTGATCC TGGCCAACAA GCTGGTCAAG GCGGTCCCGC CCGGGGCGCA CCTGCTGTTC
GTCGGCGACG TGGACCAGCT GCCCTCCGTG GGCGCGGGCC AGGTGCTGCG CGACCTGCTG
GACGGGGACT CGCCCGTGCC GAGCGTGCGA CTGACCCACG TCTTCCGCCA GGCCCAGAAC
TCCGGGGTGA TCACCAACGC CCACCGGATC AACGGCGGCG AGCCGCCGGA GTTCCACGGT
ATGTCCGACT TCTTCCTCTT CCCCTGCGAG GAGTCCGAGG ACGCGGCCGA GATGACCGTG
GACGTGGTCG CCCGCCGCAT CCCGCGCCGG TTCGGCCTCG ACCCGCGCCG GGACGTCCAG
GTCCTCACCC CCATGAAGGG CGGCCCGGCC GGGGCGGCCA ACCTCAACAC GGCCCTCCAG
GCCGCCGTGA CGCCCTCCGG CGAGCACGTC CCCGAACGCC GGTTCGGCGG GCGCGTCTTC
CGCGTCGGAG ACAAGGTCAC CCAGGTCCGC AACAACTACG ACAAGGGCGA GAACGGGGTG
TTCAACGGAA CGCTCGGCGT GGTCACGGGG CTCGACGAGG TCGCCCAGGA GGTCCTGGTC
CGCACCGACG AGGACGAGGA GATCGCCTAC GACTTCGCCG AACTCGACGA GCTCGCCCAC
GCCTACGCCA TCACCGTGCA CCGCTCCCAG GGCAGCGAGT ACCCCGCGGT GGTCGTGCCG
GTCACCACCA GCGCCTGGAT GATGCTCCAG CGCAACCTGC TCTACACGGC CGTCACGAGG
GCCAAGAAGC TGGTGGTCCT GGTCGGCTCC CGCCGCGCCC TGGCCCAGGC GGTGCGCAAC
GCCTCCTCCG GGCGCAGGCA CACGGCCCTG GCGCACCGGC TGCGGTCGGC CGGTCGGCCG
CCGGAGGAGC CCCCGCCCCC GGACGCCCCC TGA
 
Protein sequence
MPDATFRPAV VQGVLERVTY ANEENGYTVA KVDTGRGAHD LLTVVGSLMG VQPGEALRMR 
GRWGSHPQYG RQFHVDDYTT VLPATVQGIR RYLGSGLIKG IGPKMAERIV DHFGTDALEV
IEEHPERLIE VPGLGPKRTR LIADAWEEQK AIKEVMVFLQ GVEVTTSLAV RIYKKYGDAS
IQIVQKEPYR LATDVWGIGF KTADTIARAV GIPHDSPQRV MAGIQFTLSE STGDGHVYLP
EEKLISAAVK ILQVEAGLVI ECVAELVATE GVVRETVPGP EGEPVRAVYL LPMHRAEIGL
ASGLRGLLHA PADRMPAFAG VDWDVALDWL RSRTRADLAE AQREAVRLAL SEKVCVLTGG
PGCGKSFTVA SIVTLAMAKR ATIVLAAPTG RAAKRLTEMT GIEARTVHRL LELRPGGDAA
YDRDNPLDCD LLVVDEASML DVILANKLVK AVPPGAHLLF VGDVDQLPSV GAGQVLRDLL
DGDSPVPSVR LTHVFRQAQN SGVITNAHRI NGGEPPEFHG MSDFFLFPCE ESEDAAEMTV
DVVARRIPRR FGLDPRRDVQ VLTPMKGGPA GAANLNTALQ AAVTPSGEHV PERRFGGRVF
RVGDKVTQVR NNYDKGENGV FNGTLGVVTG LDEVAQEVLV RTDEDEEIAY DFAELDELAH
AYAITVHRSQ GSEYPAVVVP VTTSAWMMLQ RNLLYTAVTR AKKLVVLVGS RRALAQAVRN
ASSGRRHTAL AHRLRSAGRP PEEPPPPDAP