Gene Ndas_3837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3837 
Symbol 
ID9247708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4601647 
End bp4603539 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content69% 
IMG OID 
ProductGTP-binding protein TypA 
Protein accessionYP_003681740 
Protein GI297562766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0712464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.953349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCG CTACGCCCGT CGAGGGCTCC GCACGCCGCA GCGACCTCCG CAACGTCGCG 
ATCGTGGCCC ATGTGGACCA CGGCAAGACG ACCCTCGTTG ACGCCATGCT CTGGCAGTCC
GGTGTGTTCC GGGAGAACCA GGACGTCGAT GACCGGGTGA TGGACTCCAA CGACCTGGAG
CGCGAGAAGG GCATCACCAT TCTCGCCAAG AACACGGCCG TCCACTACAC CACGCCCGAG
GGCGAGGACG TGGTCATCAA CATCATCGAC ACCCCCGGCC ACGCCGACTT CGGCGGCGAG
GTCGAGCGCG GCCTGTCGAT GGTCGACGGC GTGGTCCTGC TCGTGGACGC CAGCGAGGGC
CCCCTCCCGC AGACCCGCTT CGTGCTGCGC AAGGCCCTCC AGGCCAAGCT CCCCGTCATC
CTCGTGATCA ACAAGGTCGA CCGGCCCGAC AGCCGGATCG CCGAGGTCGT GGACGACACC
TACGAGCTGT TCATGGACCT GGACGCCGAC GAGTCGCAGA TCGAGTTCCC GATCGTCTAC
GCCTGCGCCC GCGACGGCAA GGCCTCCCTG GAGCGCCCCG CCAACGGCAC GGTGCCCGAC
AACGACAACC TCGTGCCGCT GTTCAGCACC ATCCTGGACA CCATCCCGGC CCCCGAGTAC
ATCCCCGAGG CCCCGCTCCA GGCGCACGTG ACCAACCTGG ACGCCTCCCC GTTCCTCGGC
CGCCTGGCGC TGTGCCGCAT CCAGCAGGGC GAGCTGCGCA AGGGCCAGCA GGTCGCGTGG
ATCCGCACCG ACGGCAGCAC CCAGCAGGTC AAGATCACCG AGCTGCTCAT GACCGAGGGC
CTGGAGCGCA AGCCCGCCGA GAAGGCCGGG CCCGGCGACA TCGTCGCCAT CGCCGGTATC
GAGGACATCA TGATCGGCGA GACCCTCGCC GACCTGGAGA ACCCGGTCCC GCTGCCGCTC
ATCCAGGTGG ACGAGCCCGC CATCTCCATG ACCATCGGCA CCAACACCTC GCCGCTGGTC
GGCAAGGTCA AGGGCGCCAA GGTCACCGCG CGCCTGGTCA AGGACCGCCT CGACAAGGAG
CTCGTCGGCA ACGTCTCCCT GCGGGTCCTG CCCACCGAGC GCCCCGACGC CTGGGAGGTG
CAGGGCCGCG GCGAGCTGGC GCTGGCCATC CTGGTCGAGC AGATGCGCCG CGAGGGCTAC
GAGCTGACCG TCGGCAAGCC GCAGGTGGTC ACCCGGGTCG TGGACGGCAA GGTGCACGAG
CCCGTCGAGC GCCTCACCGT GGACGCCCCC GAGGAGTACA TGGGCGCCAT CACGCAGCTG
CTCAGCATCC GCAAGGGCCG CATGGAGAAC ATGGTCAACC ACGGCACCGG CTGGGTGCGC
ATGGACTGGC TGGTGCCCTC CCGCGGCCTC ATCGGCTTCC GCACCGAGTT CCTCACCGAG
ACCCGCGGCA CCGGTATCGC CCACCACGTC TTCGAGAAGT TCGAGCCGTG GTTCGGCGAG
CTGCGCACCC GCCCCAACGG GTCCCTGGTG GCCGACCGCG CCGGCTCGGC CGTCGCGTTC
GCGATGTTCA ACCTCCAGGA GCGCGGCACG CTCTTCGTCG AGCCGGGCAC CGAGGTCTAC
GAGGGCATGA TCGTGGGCGA GAACTCGCGC GCCGACGACA TGGACGTCAA CATCACCAAG
GAGAAGAAGC TCACCAACAT GCGCTCGGCC ACCGGCGACG AGCTGGTGCG CCTGGTGCCG
CCGCGCAAGC TGTCCCTGGA GCAGGCCCTG GAGTTCTGCC GCGAGGACGA GTGCGTGGAG
GTCACCCCCG AGCACGTGCG CATCCGCAAG GTCGTCCTGG ACCAGAAGGA GCGCGGCCGC
ATGACGGCCA ACAAGAAGCG CCAGCAGCAG TAG
 
Protein sequence
MSSATPVEGS ARRSDLRNVA IVAHVDHGKT TLVDAMLWQS GVFRENQDVD DRVMDSNDLE 
REKGITILAK NTAVHYTTPE GEDVVINIID TPGHADFGGE VERGLSMVDG VVLLVDASEG
PLPQTRFVLR KALQAKLPVI LVINKVDRPD SRIAEVVDDT YELFMDLDAD ESQIEFPIVY
ACARDGKASL ERPANGTVPD NDNLVPLFST ILDTIPAPEY IPEAPLQAHV TNLDASPFLG
RLALCRIQQG ELRKGQQVAW IRTDGSTQQV KITELLMTEG LERKPAEKAG PGDIVAIAGI
EDIMIGETLA DLENPVPLPL IQVDEPAISM TIGTNTSPLV GKVKGAKVTA RLVKDRLDKE
LVGNVSLRVL PTERPDAWEV QGRGELALAI LVEQMRREGY ELTVGKPQVV TRVVDGKVHE
PVERLTVDAP EEYMGAITQL LSIRKGRMEN MVNHGTGWVR MDWLVPSRGL IGFRTEFLTE
TRGTGIAHHV FEKFEPWFGE LRTRPNGSLV ADRAGSAVAF AMFNLQERGT LFVEPGTEVY
EGMIVGENSR ADDMDVNITK EKKLTNMRSA TGDELVRLVP PRKLSLEQAL EFCREDECVE
VTPEHVRIRK VVLDQKERGR MTANKKRQQQ