| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3832 |
|---|
| Symbol | |
|---|
| ID | 9247703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 4596134 |
|---|
| End bp | 4597684 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003681735 |
|---|
| Protein GI | 297562761 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.425556 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCG AGCTCGCGGA CGCCCTGGAG GCCGAGGGGA TCATCGAGCC CTTCCTCATC
CAGGAACTCG CCCTGCCGAT CGCGCTGGGC GGCAGCGACA TCATCGGCCA GGCCCGTACC
GGCACCGGTA AGACCCTGGC CTTCGGCCTG CCCCTGCTCC AGCGGGCGCA GAAGGACCCC
GGAACGCCCA AGCGGCCGCG CGCCCTGGTC GTGGTCCCCA CCCGCGAGCT GGCCATCCAG
GTCGCCGCGG ACCTGACCAC CGCCAGCAAG CGCAGCGGGA CCCGCATCCT GACCGTCTAC
GGCGGCCGCT CCTACGAGCC GCAGGTCAAC GGGCTCAAGG AGGGCACCGA CGTCGTCGTC
GGCACCCCGG GCCGCCTGCT GGACCTGGAG AAGCAGAAGC ACCTGCGCCT GGACGGGGTG
TCCGCGGTGG TGCTGGACGA GGCCGACAAG ATGCTCGACC TGGGCTTCCT GCCCGACATC
GAGCGCATCC TCACCAGGAC CCCGGACGAC CGCCAGACCA TGCTCTTCTC GGCCACCATG
CCGAGCGAGA TCGTCTCCCT GTCGCGCAAG TACCTGCGCC GTCCCACGCA CGTGCGCGCG
AGCGACGACG ACGAGATCGA CGGCTCGGCC ATCACGGGGC AGATCACGCA GCACGCGTTC
CGCACCCACC AGATGGACAA GATCGAGATG CTCGCCCGCC TGCTCCAGGC CAGCGACCAC
GGCCAGAGCA TGGTGTTCTG CCAGACCAAG CGGGCCTGCG ACCGGGTGGC GGGCGACCTG
GAGGCGCGCG GGTTCGCCGT CGCGGCCGTC CACGGCGACC TGGGGCAGAG CCAGCGCGAG
CGGGCCCTGC GGGCCTTCCG CAACGGCAAG ATCAACATCC TGGTCGCCAC CGACGTGGCC
GCCCGGGGAC TGGACGTGGA CGACGTCACG CACGTGGTCA ACTACGAGAC CCCCGAGGAC
GAGAAGACCT ACACGCACCG CATCGGCCGC ACCGGCCGGG CCGGGCGCAG CGGCACCGCC
GTCACCTTCG TGGACTGGCA GGAGATGCCG CGCTGGAAGC TGATCAACGG CGCCCTCGGA
CTGCCCTTCC ACGAGCCGGA GGAGACCTAC TCCACCTCGC CGCACTTCTT CGAGGCGCTG
CGGATCCCGG CCGGGACCAA GGGCAAGCTG GCCGAGGACC GGCGCGACGA TCACGCGGGT
CTGGAGGCCG AGGAGATCGA GGACATCGGC GACACCGGAG TGGCGCGCGG CGAGCGCGGC
GGCCGGCGGG GCCGGGGTCG CGTCGAGGGC GCGCGCTCGG GGAGCGGACG CGGTGAGAGC
GACCGTGACG AGGGCGGGCG CGGTCGCGGC CGCAACCGTT CGCGTCGGCG CACCCGCGGC
GGCCAGGGCA CGGCCGGGGT CGAGACCGCC CCGGGCGGGA GGGCCGAGAG CACGCCCGCC
GCCCAGGAGG CGCCGCGCGA GGGCGCGGCC CCCTCCGACG AGGGCGCGCG CAGGGTACGG
CGCCGCCGCC GCACCCGAGG CGCGGTCCGC AGGGACCCCG AGAACACCTG A
|
|---|
| Protein sequence | MSTELADALE AEGIIEPFLI QELALPIALG GSDIIGQART GTGKTLAFGL PLLQRAQKDP
GTPKRPRALV VVPTRELAIQ VAADLTTASK RSGTRILTVY GGRSYEPQVN GLKEGTDVVV
GTPGRLLDLE KQKHLRLDGV SAVVLDEADK MLDLGFLPDI ERILTRTPDD RQTMLFSATM
PSEIVSLSRK YLRRPTHVRA SDDDEIDGSA ITGQITQHAF RTHQMDKIEM LARLLQASDH
GQSMVFCQTK RACDRVAGDL EARGFAVAAV HGDLGQSQRE RALRAFRNGK INILVATDVA
ARGLDVDDVT HVVNYETPED EKTYTHRIGR TGRAGRSGTA VTFVDWQEMP RWKLINGALG
LPFHEPEETY STSPHFFEAL RIPAGTKGKL AEDRRDDHAG LEAEEIEDIG DTGVARGERG
GRRGRGRVEG ARSGSGRGES DRDEGGRGRG RNRSRRRTRG GQGTAGVETA PGGRAESTPA
AQEAPREGAA PSDEGARRVR RRRRTRGAVR RDPENT
|
|---|
| |