Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3816 |
Symbol | |
ID | 9247687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4578583 |
End bp | 4579638 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003681719 |
Protein GI | 297562745 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.111196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00416634 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGGCATCC GCTTCGACCG CGTCAGCGTC GCCTACGGGG AGACCGTGGT CCTGGACGAC CTCGACCTCA CCGTCGAACC CGGCGAGTTC ATGGCGCTGC TGGGGCCCTC CGGCTCGGGC AAGACCACCG CGCTGCGCGC CGTCGCCGGG TTCGTCCGCC CCGCCTCCGG GCGCGTCCTG CTCGGCGGGC GCGACGTCAC CGGCCTGCCG CCGCACCTGC GGGGCGTGGG CATGGTCGTG CAGAGCTACG CCCTCTTCCC CCACATGCGG GTGGACCAGA ACGTCGCCTT CGGGCTGAGG GCGCAGGGCG TGCCCCGCCG CGAGATCGCC GGACGGGTCG CCGAGGCGCT GGCCATGACC GGGATGGGGG ACTACGCGCG CCGCCACCCG CGCGAGCTGT CCGGCGGACA GCAGCAGCGG GTGGCCATCG CCCGCGCCCT GGCCATCCGC CCCGGCGTGC TGCTGCTGGA CGAGCCGCTG TCCGCGCTCG ACGCCCAGCT GCGCTCGGAC ATGCTCGCCG AACTGGCCCG CCTGCACCGC GAACTCCCCG ACGTCACGGT CCTGTACGTC ACCCACGACC AGAGCGAGGC GCTCACCCTG GCCGACCGGG TGGCGGTCCT GGACCGGGCC CGGCTGCGCG ACTGCGACAC GCCCGAGCGC CTCTACCAGC GCCCCCGGAC GCCGTTCACC GCCCGCTTCG TCGGCGGCGC CAACCTGCTG CCCGCGAGCC TGGCCGACGG ACGCGTGCAC TGCTGCGGCA CCGTCCTGGA GGCCGACCCC GGCGACCTGC CGCCCGGCAC CGGCGACGGC GACGGGCTGC GCGTGTGCCT GCGCCCGCAC CGGCTCGCCC TCGGCGAGGG CGAGCACACC CTGGAGGGCC GGGTCACCGA CGTCCAGTGG CGCGGCTCCA CCCACCGGGT CACCGTCCTG GTCGACGGCG TCCCCGTCAC CGCCGAACTC CGGGAGATGC GGACCCCGCC CGAGACCGGT GCGGCGGTCA CGCTCGGCTT CGCCCGCCGG GACGCCGTCC TGCTGCCGGA GGAGGAGGCC TCGTGA
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Protein sequence | MGIRFDRVSV AYGETVVLDD LDLTVEPGEF MALLGPSGSG KTTALRAVAG FVRPASGRVL LGGRDVTGLP PHLRGVGMVV QSYALFPHMR VDQNVAFGLR AQGVPRREIA GRVAEALAMT GMGDYARRHP RELSGGQQQR VAIARALAIR PGVLLLDEPL SALDAQLRSD MLAELARLHR ELPDVTVLYV THDQSEALTL ADRVAVLDRA RLRDCDTPER LYQRPRTPFT ARFVGGANLL PASLADGRVH CCGTVLEADP GDLPPGTGDG DGLRVCLRPH RLALGEGEHT LEGRVTDVQW RGSTHRVTVL VDGVPVTAEL REMRTPPETG AAVTLGFARR DAVLLPEEEA S
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