Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3814 |
Symbol | |
ID | 9247685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4576873 |
End bp | 4577670 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003681717 |
Protein GI | 297562743 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0708673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00438617 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTCGTGC ATAGCCGACC CGCCCGCCGG GTCGTGTGGG CGCTGTTCGC CGCGCTCGTC CTGCCGCTGT TCCTGCTCCC GCTCGGCGTC ATCGTCACCG CGTCGGTGTC CACCAACTGG AGCGGCGTCC TGCCCTCGGG GCCCACCCTG GACAACTTCG CCGGACTGTC CCGGGGCTCC ACCCTGGAGG CGCTGCGCGT CAGCGCGGTC ACCGCCGCCA CCGCCAGCGT CCTGGCCCTG GTGGCCGGGA CCTGGTCCGC GCTGACCGCG CACGCGCTGC GCCGACGCGG CAGGGCCGCC CTGGACGCCC TCTTCATGCT GCCCGTCGCG GTCCCCACGG TGGTCGTCGG ACTGGCCCTG CTGGTGGCCT TCAGCCAACC GCCCGTGCTG CTCAACGGCA CCCGGACCAT CGTGATCATC GCGCACACCG TGCTGGTGAC GGCCTTCGCC CACCAGTCGG TCTCCGCCGC CCTGGACCGG CTCGACCCGG CCTACGCCCA GGTGGCCGCC TCCCTCGGCG CCCGCCCGGC GCGGGTGCTG TTCCAGGTGC GGCTGCCCCT GCTGCTGCCC TCGCTCAGCG CCGCCGCCGG GCTCTGCTTC GCCCTGTCCA TGGGCGAACT GAGCGCCACG ATGATGCTCT ACCCGCCCAG CTGGATGCCG CTGCCGGTCC AGATCTACGC CGCCACCGAC CGGGGCGCCC TCTTCTCCGG GGCGGCCTCC GCCATCGTCC TGATGGCCGC CACCCTGGCC GTCCTGCTGC TGCTGTCCCG CGTGCGCACC CGCGCCGCCT ACCGCTGA
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Protein sequence | MLVHSRPARR VVWALFAALV LPLFLLPLGV IVTASVSTNW SGVLPSGPTL DNFAGLSRGS TLEALRVSAV TAATASVLAL VAGTWSALTA HALRRRGRAA LDALFMLPVA VPTVVVGLAL LVAFSQPPVL LNGTRTIVII AHTVLVTAFA HQSVSAALDR LDPAYAQVAA SLGARPARVL FQVRLPLLLP SLSAAAGLCF ALSMGELSAT MMLYPPSWMP LPVQIYAATD RGALFSGAAS AIVLMAATLA VLLLLSRVRT RAAYR
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