Gene Ndas_3814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3814 
Symbol 
ID9247685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4576873 
End bp4577670 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content74% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003681717 
Protein GI297562743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0708673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00438617 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTCGTGC ATAGCCGACC CGCCCGCCGG GTCGTGTGGG CGCTGTTCGC CGCGCTCGTC 
CTGCCGCTGT TCCTGCTCCC GCTCGGCGTC ATCGTCACCG CGTCGGTGTC CACCAACTGG
AGCGGCGTCC TGCCCTCGGG GCCCACCCTG GACAACTTCG CCGGACTGTC CCGGGGCTCC
ACCCTGGAGG CGCTGCGCGT CAGCGCGGTC ACCGCCGCCA CCGCCAGCGT CCTGGCCCTG
GTGGCCGGGA CCTGGTCCGC GCTGACCGCG CACGCGCTGC GCCGACGCGG CAGGGCCGCC
CTGGACGCCC TCTTCATGCT GCCCGTCGCG GTCCCCACGG TGGTCGTCGG ACTGGCCCTG
CTGGTGGCCT TCAGCCAACC GCCCGTGCTG CTCAACGGCA CCCGGACCAT CGTGATCATC
GCGCACACCG TGCTGGTGAC GGCCTTCGCC CACCAGTCGG TCTCCGCCGC CCTGGACCGG
CTCGACCCGG CCTACGCCCA GGTGGCCGCC TCCCTCGGCG CCCGCCCGGC GCGGGTGCTG
TTCCAGGTGC GGCTGCCCCT GCTGCTGCCC TCGCTCAGCG CCGCCGCCGG GCTCTGCTTC
GCCCTGTCCA TGGGCGAACT GAGCGCCACG ATGATGCTCT ACCCGCCCAG CTGGATGCCG
CTGCCGGTCC AGATCTACGC CGCCACCGAC CGGGGCGCCC TCTTCTCCGG GGCGGCCTCC
GCCATCGTCC TGATGGCCGC CACCCTGGCC GTCCTGCTGC TGCTGTCCCG CGTGCGCACC
CGCGCCGCCT ACCGCTGA
 
Protein sequence
MLVHSRPARR VVWALFAALV LPLFLLPLGV IVTASVSTNW SGVLPSGPTL DNFAGLSRGS 
TLEALRVSAV TAATASVLAL VAGTWSALTA HALRRRGRAA LDALFMLPVA VPTVVVGLAL
LVAFSQPPVL LNGTRTIVII AHTVLVTAFA HQSVSAALDR LDPAYAQVAA SLGARPARVL
FQVRLPLLLP SLSAAAGLCF ALSMGELSAT MMLYPPSWMP LPVQIYAATD RGALFSGAAS
AIVLMAATLA VLLLLSRVRT RAAYR