Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3812 |
Symbol | |
ID | 9247683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4575154 |
End bp | 4575702 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | putative signal transduction protein with EFhand domain |
Protein accession | YP_003681715 |
Protein GI | 297562741 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.435134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00141788 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGACACCG TTCCCGCCAC CGCGGTCGCC GAGAGGTTCG GCCGCCTCTT CGACACGCTG GACACCGACC GCGACGGGGC CATCACCTGG GACGACTACC AGCGCCTGGT CGACCGCTAC ACGAAGGGGT ACGCGCTGGA CCTGAGCGAC CGCCGGGCCC AGGCCGTCCA CGCCTCCTAC CAGATGCTCT GGCTGGAGCT GCTGCGCCAC GGCTCGCCCG CCCAGGCGCG CCTGGACCGG GATGCGTTCG TCGCGGCGAT GCACGCGGCC TCCGAGGACC GCAGCCGGTT CAACATGACC GAGGGCGTGG CCGAGGCGGT CTTCGACCTG CTCGACACCG ACGACGGCGG GTCGATCAGC GAGGCGGAGT ACGTCAGGTA CGCCGAGGTC CTGGGGGCCT CCTCCTCCGA CGCCCTGGAC CGGTTCAGGG CCCTGGACAC CGACGGCGAC GGGTTCATCG GCCGCGCGGA GTTCGTCCTG TCGGCCCGGG AGTACCTCTT CGGCGAGGAC TCCGACGCCC CGGGCGGGTT CGTCTTCGGC GTGATCTGA
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Protein sequence | MDTVPATAVA ERFGRLFDTL DTDRDGAITW DDYQRLVDRY TKGYALDLSD RRAQAVHASY QMLWLELLRH GSPAQARLDR DAFVAAMHAA SEDRSRFNMT EGVAEAVFDL LDTDDGGSIS EAEYVRYAEV LGASSSDALD RFRALDTDGD GFIGRAEFVL SAREYLFGED SDAPGGFVFG VI
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