Gene Ndas_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3812 
Symbol 
ID9247683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4575154 
End bp4575702 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative signal transduction protein with EFhand domain 
Protein accessionYP_003681715 
Protein GI297562741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.435134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00141788 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGACACCG TTCCCGCCAC CGCGGTCGCC GAGAGGTTCG GCCGCCTCTT CGACACGCTG 
GACACCGACC GCGACGGGGC CATCACCTGG GACGACTACC AGCGCCTGGT CGACCGCTAC
ACGAAGGGGT ACGCGCTGGA CCTGAGCGAC CGCCGGGCCC AGGCCGTCCA CGCCTCCTAC
CAGATGCTCT GGCTGGAGCT GCTGCGCCAC GGCTCGCCCG CCCAGGCGCG CCTGGACCGG
GATGCGTTCG TCGCGGCGAT GCACGCGGCC TCCGAGGACC GCAGCCGGTT CAACATGACC
GAGGGCGTGG CCGAGGCGGT CTTCGACCTG CTCGACACCG ACGACGGCGG GTCGATCAGC
GAGGCGGAGT ACGTCAGGTA CGCCGAGGTC CTGGGGGCCT CCTCCTCCGA CGCCCTGGAC
CGGTTCAGGG CCCTGGACAC CGACGGCGAC GGGTTCATCG GCCGCGCGGA GTTCGTCCTG
TCGGCCCGGG AGTACCTCTT CGGCGAGGAC TCCGACGCCC CGGGCGGGTT CGTCTTCGGC
GTGATCTGA
 
Protein sequence
MDTVPATAVA ERFGRLFDTL DTDRDGAITW DDYQRLVDRY TKGYALDLSD RRAQAVHASY 
QMLWLELLRH GSPAQARLDR DAFVAAMHAA SEDRSRFNMT EGVAEAVFDL LDTDDGGSIS
EAEYVRYAEV LGASSSDALD RFRALDTDGD GFIGRAEFVL SAREYLFGED SDAPGGFVFG
VI