Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3733 |
Symbol | |
ID | 9247602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4482021 |
End bp | 4482758 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003681637 |
Protein GI | 297562663 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.502794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATCG ACCCCAGCAA CCCGCTGCCC AAGTACAGCC AACTGCGCGA CCTGCTCCTG GACTGGATCA CCGCGGCGGG GCTGGGCGTG GACGACATGA TCCCCTCCGA GCGCGAGCTC AGCGCCACCT ACGGGCTCTC GCGGATGACC GTCCGCCAGA CCATCGACCT GCTGGTGGCC GAGGGGCGGC TGTACCGGGT CCCCGGCAAG GGGACCTTCA TCGCCCGCCC CAAGATCGAG ATGTCCCTGG TGCTGGCCTC CTTCAGCGAG GACATGCGCG CACGCGGCTT CGAACCGGGG GCCCGCGAGC TGATCCGCCA GGTCATCCCG GCGAGCGGGC ACACCGCGCG CATGCTGGAC ATCGCGCCGG GCACCCTGGT GCACCACATC GAGCGCATGC GCACCGCCGA CGACGAGCCG ATGGCCGTGG AGCGCTCCAA CATCCCCGCC GCCATGGTCC CGGGCCTGGA GGACTACGAC CTCGCCGAAC GGTCCCTCTA CGAGGTGCTG GAAAACGAGT TCGACATCCT GTTGGATTCC GGGGAACAGA CCATCGAGGC CGGGATCTGC GACTCGGCCG ACTCCCGACT CCTCGGCCTG CCAGCTGGGA GCCCGGTGCT GGTGATGCAG CGCCGGAGCT TCGCCAACGG ACAGTGCGTG GAACTGGCGC TGTCCACCTA CCGAGCCGAC CGCTACCAGC TGCACTCCCG GCTGGACCCC CGGCGGCACG GCGACTGA
|
Protein sequence | MSIDPSNPLP KYSQLRDLLL DWITAAGLGV DDMIPSEREL SATYGLSRMT VRQTIDLLVA EGRLYRVPGK GTFIARPKIE MSLVLASFSE DMRARGFEPG ARELIRQVIP ASGHTARMLD IAPGTLVHHI ERMRTADDEP MAVERSNIPA AMVPGLEDYD LAERSLYEVL ENEFDILLDS GEQTIEAGIC DSADSRLLGL PAGSPVLVMQ RRSFANGQCV ELALSTYRAD RYQLHSRLDP RRHGD
|
| |