| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3725 |
|---|
| Symbol | |
|---|
| ID | 9247594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4470531 |
|---|
| End bp | 4475399 |
|---|
| Gene Length | 4869 bp |
|---|
| Protein Length | 1622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | NAD-glutamate dehydrogenase |
|---|
| Protein accession | YP_003681629 |
|---|
| Protein GI | 297562655 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.339605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGGC AATCCGACGT CCAGCTCCAG AAGCTGCTCA GTGAGGCGGC CGCCAAGTGG
TCCCCCGGGG CGCGCATCAG CCCCGAGGAG GCCGACGCCG TCCGCCGCTT CCTCCCCGTG
TACTACCGGC ACACGGACCC CGAGGAGATC AGCGGCCGTT CCCCCGAGCA GATCTGTGGC
GCGGCCGAGG CCCACCGCTC CTTCGGCGCC CGGCGCGCCG CCGGACGGGC CAAGGTCCGC
GTCTACACCC CCGACGCCGA GCGCGACGGA TGGGACCAGC AGACCGGCGT CGTGGAGATC
GTCACCGACA ACGCCCCCTT CCTCGTCTCC TCCGTCACCA TGGCCCTCAG CGACCTCGGC
GCCGGGGTCC GGCTGATCAT CCACCCCCAG ATGACCGTCG GCCGCGACCT GGAGGGCCGC
CTGGTCCGGG TGGAGCCGGA GGCCGGCGGC GAGGGCCTGC TGCCGATCGA CGAGTCCTGG
ATGCACATCG AGATCGACCC GCAGCCCGAC CCCGAGCGCC TGCGCGAGAT CACCGCCCGC
GTCGAGTCCG TCCTGGCCGA CGTGCGCTAC GTGGACGAGG ACGCCGGCAA GATGAGCGAC
CGGGCCATCC GGATCGCCGA CGAGCTGGCG GCCTACCCCG ACCGGCTCGT GGCCGGGGGA
GTGGACCCGC GCGAGATCGG CGAGAGCGTC GACTTCCTGC GCTGGATCGC GGGCCGCCAC
TTCACCTTCA TGGGCTACCG CGAGTACACC CTGGTCACCG ACGAGAACGG CGACGACTCC
CTGCGCCCCG AGCCCGGATC GGGCCTGGGC ATCCTGCGCA TGGACTCGCC CGCCTCCACC
GGCTTCGCCG CCCTGCCGCC CGAGATCCGC GGCAAGGCCC GCGAGCCCTA CATCCTGGTC
CTGACCAAGG CCAACTCGCG CGCCACGGTC CACCGCCCCA AGTACCTGGA CTACATCGGC
GTCAAGAAGT TCGACGCCCA GGGCAACATC GTCGGCGAGC GCCGGTTCCT CGGCCTGTTC
ACCTCCCAGG CCAGCACCAC CAGCATCGCC CAGATCCCCA TCATGCGCCG CAAGCAGGCC
GAGGTGCTGG CCCTGGCCGG GTTCGAGGCC GACAGCTACG ACGGCAAGGA CCTCATCGAA
CTGCTGGAGA CCTTCCCCCG CGAGGAACTC CTCCAGATCC CCGTGGGCGA GCTGTACAAC
ATCGTCCGCG GCGTCCTGCG CCTGCGCGAC CGGCGCGGCA CCAAGCTGTT CATGCGCCGC
GACCCCTACG GCGGCCGGTA CATGTCCTGC TTCGTGTACA TGCCGCGCGA CCAGTACAGC
ACCCGGGTGC GCCTGGACAT CCAGGACGTC CTCGCCGAGG CCTTCCACGG CGCCACGATG
GACCACAACG TGCTCATCGG AGCCGCCCCG CTGGCCCGCC TGTACCTGGT GGCCCGCGCC
CAGCACGGGC GCACCCTCGC CGACATCGAC CAGGTCGCCC TGGAGGAGAA GGTCCGCGAG
GCGGCCCGCT CCTGGGACCT GGACTTCGAC GACGCCCTCG CCGCGGCCTT CGGCCCCGTG
CGCGCCACCG AGTTCAAGGA GCGCTACTCG GGCGGCCTCA CCGAGGCCTA CAAGGTCGAC
AACAGCCCCG CCACGGCGGC GGGAGACATC CGCGAGCTGG AGAAGCTCCT CGCCCGCACC
GACCCCGGGC GGCGCCACGG CGAGTTCTCC GCGGTCCTGT ACCAGCGCGA GGACGCCGAC
CCCGGCTGCT GGCGGTTCCG CCTCTACCGG ATCGGCGAGC CCATCTCGCT CTCGCGCGTC
CTGCCCGTCC TGGAGAACCT GGGCGTGGAG GTCGTCGACG AGTGGCCCTA CGACGTCACC
GTCCGGGACG TGGGCCGGGT GTGGATCTAC GACTTCGGCC TCGGCCCGAT CCCCGAGTCC
GACCTGGCTC CCGAGCGCCT CAAGTGCCTG TTCGAGGAGG CCTTCGACGC CTCCTGGCGC
GACCTGGGCG AGAGCGACCG CTTCAACGCC CTGGTGGTGC GGGCCGGCCT CGACTGGCGC
CAGCTCACCG TGCTGCGCGC CTACGCCAAG TACCTGCGCC AGACCGGTTC CACCTTCACC
CCCGAGTACC TGGCCGACGT GCTGGTGGCC AACGTCGGGA TCGCCAACCT GCTGGTCGAG
CTGTTCGAGA CCCGCTTCGA CCCCGACCAG CCCGGCGAGG GCCGCGACGA GCGCGCCGAC
GTCCTCGTCG GCAAGGTCGA GGGCGAACTG GAGGCCGTGG CCAGCCTGGA CCACGACCGC
ATCCTGCGCT CGTTCCTGGC GGCCATCCGC GCCACCCTGC GCACCAACCA CTACCAGGGT
CACCCCTACC TGGTGCTCAA GCTCGACCCG CAGGAGATCC CGGACCTGCC CCACCCGCGG
CCCCGGTTCG AGATGTACGT CTACTCCCCG CGCGTGGAGG GCGTGCACCT GCGCTTCGGC
GCGGTCGCGC GCGGCGGGCT GCGCTGGTCG GACCGCTTCG AGGACTTCCG CACCGAGATC
CTGGGCCTGG TCAAGGCCCA GATGGTCAAG AACTCCGTCA TCGTCCCCAG CGGCGCCAAG
GGCGGCTTCG TGTGCAAGCG GCTGCCCCAG AACGGCACCC GCGACGAGGT GATGGCCGAG
GTCGTGGCCT GCTACAAGCA GTTCATCAGC GGCCTGCTCG ACGTCACCGA CAACCTCGTG
GACGGCGAGA TCGTGCACCC CGAGCGCACC GTCCTGCACG ACGGCGACGA CTCCTACCTC
GTGGTCGCCG CCGACAAGGG CACCGCCACC TTCTCCGACA CCGCCAACGC CATCTCCACC
GAGCGCGGCT TCTGGCTCGG CGACGCCTTC GCCTCCGGCG GCTCGGTCGG CTACGACCAC
AAGGCCATGG GCATCACCGC GCGCGGCGCC TGGGAGTCGG TCCGGTTCCA CTTCCGCGAG
ATGGGCGTGA ACGTGCAGGA GGAGCCGTTC ACCGTCGTCG GCATCGGCGA CATGTCCGGC
GACGTGTTCG GCAACGGCAT GCTGCTCTCC CAGCAGATCC GGCTGATCGC GGCCTTCGAC
CACCGCCACG TCTTCCTGGA CCCCGACCCC GACCCGTACA CCTCCTGGGT GGAGCGCAAG
CGCGTCTTCG ACCTGCCCCG CAGCACGTGG GAGGACTACG ACGCCAAGCT CATCTCCGAG
GGCGGCGGCG TGCACCCGCG CACGGCCAAG TCCGTGCCGA TCACGCCGCA GGTGCGCGAG
GCCCTGGGCA TCGAGGAGGG GGTGCACAGC CTCACACCGG ACGAGCTGAT CCGGTGCGTG
CTCACCTCGC CCGTCGACCT GCTGTGGAAC GGCGGCATCG GCACCTACGT CAAGGCCAGC
ACCGAGACGC ACGCCGACGC GGGCGACAAG GCCAACGACC AGCTGCGCGT GGACGCCGCC
GAGCTGCGCG TCAAGGTGGT CGGCGAGGGC GGCAACCTGG GCCTGACCCA GGACGCGCGG
ATCGAGTTCG CCCGCGCGGG CGGTCGGATC AACACCGACT TCATCGACAA CTCCGCCGGT
GTGGACACCT CCGACCACGA GGTCAACATC AAGATCATGC TCGACCGCGA GGTGCGGTCG
GGCAAGCTGG ACAAGGCCGA CCGCGACCAG CTGTTCATCG ACATGACCGA CGAGGTCGCC
GAGCTGGTCC TGGACAACAA CGACGCGCAG AACACCGTGC TGGCCGCCGC TCGCAAGCAG
GACGGCCAGA TGCTGCACGT CCACGGCCGC TACATGCGCC ACCTGGAGCG CACCAGGGTG
CTCAAGCGCA AGCAGGAGGA CCTGCCCTCC GACAAGACGA TCGCGGAGCG GCGCGCGGCG
GGCAGGGGCC TGACCAGCCC GGAGTTCGCC ACGCTGCTGT CGTACACCAA GATCAGCCTC
AAGGACCAGC TCGAGCTGTC CGACCTGGCC GAGGACCCCT ACCTGACCGA CACCCTGACG
GCGTACTTCC CGACGCCCCT GCGGTCGGAG CGCTTCGCCG AGGGCGTGCG CTCCCACCCG
CTGCGCCGGG AGATCATCGT CAACCAGGTC GTCAACCAGA TGGTCAACCG CTCCGGTCTG
ACCTTCGCGT TCCGGCTCAA CGAGGAACTG GGCTCCAGCT CCGCCGACAT CGCCCGCGCC
TACCTGGTGG TGCAGGACGT GCTGGGGCTG CGCCGGTTCT GGAGCAGGCT GGAGGAGCTG
GACCACGAGA TCTCGATGGA CAGCCAGCTC GTCCTGCTGC TGGAGGCGCG CAAGCTCGCC
GAGCGCTCCG CCCGGTGGCT GCTGCGCAAC CGCACCTTCC CCTTCGACAT CAGCAGCGAG
ATCGGCTACT TCGCCGACGG CGTGGGCGAG GTGCTGCCGC AGCTGGTCGA TCTGCTGCGG
GGACGCGACC GCGAGGCCTT CGTCGAGCGC CGCGACCGCT ACACGTCGAT GGGCGTGCCG
ACCGAGCTGG CCGAGCGGGT GGCCGTGATG GTGCCCGCCT ACTCCACGCT GGACCTGGTG
GAGATCGCCC AGCGCACCGG TCGCCCGGTG GAGAAGGTCG CCGAGCTCTA CTTCGAGCTG
GCCGACCGGC TCAACATCAG CTGGTGGCGC GAGCGCGTCA TCGACCTGCC GCGCGACGAC
CGGTGGGTGA CGACGGCGCG CTCCTCGCTG CGCGACGACC TGTACGCGGC GCACGCCGAC
CTGACCGCGC GGGTGCTGGA GAGCGGTCCG GCGCAGGAGC CCTCCGAGTT GATCGCCGCG
TGGATCGACC AGAACGGCGA CCGGGTGCAG CGCGCCGGGA TCACGCTGTC GGAGATCCAG
GAGAACGAGC GCTTCGACCT GGCCACGCTG TCCGTGGCGC TGCGGTCCTT CCGCGGCCTG
GTGGGCTAG
|
|---|
| Protein sequence | MSGQSDVQLQ KLLSEAAAKW SPGARISPEE ADAVRRFLPV YYRHTDPEEI SGRSPEQICG
AAEAHRSFGA RRAAGRAKVR VYTPDAERDG WDQQTGVVEI VTDNAPFLVS SVTMALSDLG
AGVRLIIHPQ MTVGRDLEGR LVRVEPEAGG EGLLPIDESW MHIEIDPQPD PERLREITAR
VESVLADVRY VDEDAGKMSD RAIRIADELA AYPDRLVAGG VDPREIGESV DFLRWIAGRH
FTFMGYREYT LVTDENGDDS LRPEPGSGLG ILRMDSPAST GFAALPPEIR GKAREPYILV
LTKANSRATV HRPKYLDYIG VKKFDAQGNI VGERRFLGLF TSQASTTSIA QIPIMRRKQA
EVLALAGFEA DSYDGKDLIE LLETFPREEL LQIPVGELYN IVRGVLRLRD RRGTKLFMRR
DPYGGRYMSC FVYMPRDQYS TRVRLDIQDV LAEAFHGATM DHNVLIGAAP LARLYLVARA
QHGRTLADID QVALEEKVRE AARSWDLDFD DALAAAFGPV RATEFKERYS GGLTEAYKVD
NSPATAAGDI RELEKLLART DPGRRHGEFS AVLYQREDAD PGCWRFRLYR IGEPISLSRV
LPVLENLGVE VVDEWPYDVT VRDVGRVWIY DFGLGPIPES DLAPERLKCL FEEAFDASWR
DLGESDRFNA LVVRAGLDWR QLTVLRAYAK YLRQTGSTFT PEYLADVLVA NVGIANLLVE
LFETRFDPDQ PGEGRDERAD VLVGKVEGEL EAVASLDHDR ILRSFLAAIR ATLRTNHYQG
HPYLVLKLDP QEIPDLPHPR PRFEMYVYSP RVEGVHLRFG AVARGGLRWS DRFEDFRTEI
LGLVKAQMVK NSVIVPSGAK GGFVCKRLPQ NGTRDEVMAE VVACYKQFIS GLLDVTDNLV
DGEIVHPERT VLHDGDDSYL VVAADKGTAT FSDTANAIST ERGFWLGDAF ASGGSVGYDH
KAMGITARGA WESVRFHFRE MGVNVQEEPF TVVGIGDMSG DVFGNGMLLS QQIRLIAAFD
HRHVFLDPDP DPYTSWVERK RVFDLPRSTW EDYDAKLISE GGGVHPRTAK SVPITPQVRE
ALGIEEGVHS LTPDELIRCV LTSPVDLLWN GGIGTYVKAS TETHADAGDK ANDQLRVDAA
ELRVKVVGEG GNLGLTQDAR IEFARAGGRI NTDFIDNSAG VDTSDHEVNI KIMLDREVRS
GKLDKADRDQ LFIDMTDEVA ELVLDNNDAQ NTVLAAARKQ DGQMLHVHGR YMRHLERTRV
LKRKQEDLPS DKTIAERRAA GRGLTSPEFA TLLSYTKISL KDQLELSDLA EDPYLTDTLT
AYFPTPLRSE RFAEGVRSHP LRREIIVNQV VNQMVNRSGL TFAFRLNEEL GSSSADIARA
YLVVQDVLGL RRFWSRLEEL DHEISMDSQL VLLLEARKLA ERSARWLLRN RTFPFDISSE
IGYFADGVGE VLPQLVDLLR GRDREAFVER RDRYTSMGVP TELAERVAVM VPAYSTLDLV
EIAQRTGRPV EKVAELYFEL ADRLNISWWR ERVIDLPRDD RWVTTARSSL RDDLYAAHAD
LTARVLESGP AQEPSELIAA WIDQNGDRVQ RAGITLSEIQ ENERFDLATL SVALRSFRGL
VG
|
|---|
| |