Gene Ndas_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3692 
Symbol 
ID9247561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4430287 
End bp4431090 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID 
ProductRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily 
Protein accessionYP_003681596 
Protein GI297562622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.364276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGA GGGGGCCCGC TCTGACAGCG AAGACCGAGC ACGCGGTGCC CGACAGGGCC 
CGCGCGAGAG AGTTGTTCGA GCGCCTCGGC GAACTCGAGG CGGACTCCGA GGAGCGCCGG
AGGATCCGCG ACGAGCTGGT GGAGCTCCAC CTGCCCTTGG TGGAGTACCT GGCCCGCCGC
TTCCGCAACC GCGGCGAGTG GCTGGACGAC CTCACCCAGG TGGCCACGAT CGGGCTGATC
AAGTCCATCG ACCGGTTCGA CCTGGAGCGC GGGGTGGAGT TCTCCACCTA CGCCACCCCC
ACCATCGTCG GTGAGATCAA GCGGCACTTC CGCGACAAGG GCTGGGCGGT GCGGGTTCCA
CGCCGCCTCC AGGAGCTGAA GCTCTCGCTC ACCAAGGCGG TCAGCGACCT GTCGCAGCGG
GAGGGGCGCT CCCCGACCGT CGCCGAGCTC GCGGCGCACC TGCAGATGAC CGAGGAGGAG
GTGCTGGAGG GCCTGGAGTC CGCCAACGCC TACTCGACGG TGTCGCTGGA CGCGCCCGAC
AGCGGGGACG AGGACGCGCC CGCGGTGGCC GACTCACTGG GCATCGTGGA CGAGTCCCTG
GAGGGCGTGG AGTACCGGGA GTCGCTCAAG CCGCTCCTGG AGCAGCTTCC GCCGCGGGAG
AAGCGCATCC TGCTGCTGCG CTTCTTCGGC AACATGACGC AGTCGCAGAT CGCCCAGGAG
CTGGGGATCT CGCAGATGCA CGTGTCCCGT CTGCTGGCCC GCACCCTGGC GCAGCTGCGC
CAGGCGCTGA CCACCGACGA CTGA
 
Protein sequence
MSERGPALTA KTEHAVPDRA RARELFERLG ELEADSEERR RIRDELVELH LPLVEYLARR 
FRNRGEWLDD LTQVATIGLI KSIDRFDLER GVEFSTYATP TIVGEIKRHF RDKGWAVRVP
RRLQELKLSL TKAVSDLSQR EGRSPTVAEL AAHLQMTEEE VLEGLESANA YSTVSLDAPD
SGDEDAPAVA DSLGIVDESL EGVEYRESLK PLLEQLPPRE KRILLLRFFG NMTQSQIAQE
LGISQMHVSR LLARTLAQLR QALTTDD