Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3681 |
Symbol | |
ID | 9247550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4418017 |
End bp | 4421676 |
Gene Length | 3660 bp |
Protein Length | 1219 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | 2-oxoglutarate dehydrogenase, E1 subunit |
Protein accession | YP_003681585 |
Protein GI | 297562611 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGTCTG AGGCGTCTCA ACCCCTGACA GATTTCGGTC CCAACGAGTG GTTGGTCGAG GAGCTTTATC AGAAGTACTT GAACGACCCG AACTCCGTTG ACAAGGCCTG GTGGAACTTC TTCGCGGACT ACAAGCCCGC GGAGACTGCT GGCGCGAAGG GCGGGAGCGG CGCGAAGGCG CAGGGCGAGA AGGCCCCCGC GGCCTCCGCC CCCAAGAAGA AGCCGACCGC CCCCGCGGCC CCGGCTCCGT CCGCCAAGCC GAAGAGCAAG GACGACAAGG AGGGCAAGGA CGAGGCCCTC CAGGTCAAGC AGGAGCGTCT GCGCGGCGCA CCCGCGCGGA CCGCGACCAA CATGGAGTCG AGCCTGGGCC TGCCCACCGC CACCAGCGTG CGCGCGGTGC CGGTCAAGCT GCTCTTCGAC AACCGCATCG TCATCAACAA CCACCTCCGG CGCGGCCGTG GCGGGAAGGT CTCCTTCACC CACCTCATCG GTTACGCCAT GGTCAAGGCC CTCAAGGCCC TGCCGGAGAT GAACCACTCC TACGTGGAGG TGGACGGCAA GCCCGGTGTC GCCAAGCCCG AGCACGTGAA CTTCGGCCTG GCGATCGACC TCCAGAAGCC CGACGGCTCC CGGCAGCTGG TCGTGCCCTC CATCAAGAAG TCCGACGAGA TGGACTTCAC GGAGTTCTGG AGCGGCTACG AGGACCTGGT CCGCAAGGCC CGCAGCAACA AGCTGGGCGT GCCGGACTTC CAGGGCACCA CCATCAGCCT CACCAACCCC GGCGGCATCG GCACCGTGCA CTCGGTCCCG CGCCTGATGC CGGGCCAGGG CACCATCCTG GGCGTGGGCG CGATGGAGTA CCCGGCCGAG TTCCAGGGCG CCTCCTCCGA CACCCTGGCC GAGCTGGGCA TCAGCAAGGT CATGACGCTG ACCTCCACCT ACGACCACCG CATCATCCAG GGTGCGCAGT CCGGTGAGTT CCTGCGCCGG ATCCACCAGC TGCTGCTGGG CGAGGACGGT TTCTACGACG AGATCTTCAA CTCGCTGCGC ATCCCCTACG AGCCGGTGCG CTGGGTGCAG GACATCCACG TCAACAAGGC CACCCAGCTC GACAAGACCA CCCGGGTCCA GGAGCTGATC CACGCCTACC GCGTGCGCGG CCACCTGATG GCCGACACCA ACCCGCTCGA CCACGAGCAG CGCAAGCACC CCGACCTGGA CGTGCTCGAA CACGGCCTCA CCCTGTGGGA CCTGGACCGC GAGTTCCCCA CCGGGGGCTT CGGCGGCAAG CAGGTCATGA AGCTGCGCGA CGTGCTGGGC GTGCTGCGCG ACACCTACTG CCGCACGGTG GGTATCGAGT ACATGCACAT CCAGAGCCCG GAGGAGCGGG AGTGGATCCA GGCGCACGTC GAGCGCGAGC ACGAGAAGCT CGACCGCGAC GAGCAGCTGC ACATCCTGCA CCGGCTCAAC AGCGCCGAGG CCTTCGAGAC CTTCCTCCAG ACCAAGTACG TGGGCCAGAA GCGCTTCTCC CTGGAGGGCG GCGAGTCGCT GATCCCGCTG CTGGACGGCG TGATCTCCAA GGCCGCCAAG GCCGAGCTGG ACGAGGCCGT CATCGGCATG GCCCACCGAG GCCGCCTGAA CGTGCTGGCC AACATCTGCG GCAAGTCCTA CGCGCAGATC TTCGGTGAGT TCGAGGGCAA CCTCGACCCG CGCAGCGCGC ACGGCTCGGG CGACGTCAAG TACCACCTGG GCACCGAGGG CACCTTCGAG ACCCACGACG GCCAGAAGAT CCGCATCTCG CTGGCCGCCA ACCCGTCCCA CCTGGAGACG GTCGACCCGG TCGCCGAGGG CATCGTCCGC GCCAAGCAGG ACGTGCTCAA CAAGGGCCCG CAGGGCTTCA CCGTCCTGCC GATCCTCATC CACGGCGACG CCGCGTTCGC CGGGCAGGGC GTGGTCGCCG AGACGCTGAA CCTGTCGCAG CTGCGCGGTT ACCGGACCGG CGGCACGGTG CACGTCATCG TGAACAACCA GGTGGGCTTC ACCACCTCGC CGTCCGACAG CCGCTCCAGC GTCTACGCCA CGGACGTGGC GCGGATGGTG CAGGCGCCGA TCTTCCACGT CAACGGGGAC GACCCCGAGG CCGTGGTCCG GGTCGCGCAC CTGGCCTTCG CCTACCGCCA GGCGTTCAAC AAGGACGTCG TCATCGACCT GGTCTGCTAC CGGCGCCGCG GCCACAACGA GGGCGACAAC CCCGCCTTCA CCCAGCCGCT GATGTACGAC GTCATCGACG CCAAGCGCTC CACCCGCAAG CTGTTCACCG AGGCCCTCAT CGGCCGCGGC GACATCACGG TGGAGGAGGC GGAGTCGGCG CTGCGCGACT ACCAGTCGGA GCTGGAGCGG GCCTTCACCG AGACCCGCGA GGTCGAGAAG AAGCCGATCG AGCCCGGCTC CGTGGTCAAG CCCGAGGTGT TCACCGAGGG CCGCCTGGAG CACTCCGCCG TCGAGACGGC GATCAGCACC GAGACGGTCA AGCGGGTCAT CGACACCCAG GTGTCGCTGC CCGAGGGCTT CACGCCGCAC CCGCGGCTGG CCCCCCAGCT CTCGCGCCGC GCGACGATGG TCGAGACCGA CGCGATCGAC TGGGCCACCG GTGAGCTGCT GGCCTTCGGG TCGCTGCTGC TGGACGGCCA CCCCGTCCGC CTCATCGGCC AGGACAGCCG CCGCGGCACC TTCGGCCAGC GCCACGCCAC GCTGATGGAC CGCGAGACCG GCGAGACCCA CACGCCGCTC AAGCAGTTCG ACGACGGCAT CACCCGGTTC CACGTGCACG ACTCCCTGCT GAGCGAGTAC GCGGCCCTGG GCTTCGAGTA CGGCTACTCG CTGACCCGTC CCGACGCCCT GGTGATGTGG GAGGCGCAGT TCGGCGACTT CGTCAACGGC GCGCAGACCA TCATCGACGA GTACATCAGC GCGGGCGAGC AGAAGTGGGG ACAGCGCTCC AGCGTGACCC TGCTGCTGCC GCACGGCTAC GAGGGCCAGG GGCCGGACCA CTCCTCCGCC CGCATCGAGC GGTTCCTGCA GCAGTGCGCG CAGGAGAACA TGACGGTGGC CCACCCCAGC ACCCCGGCGA GCTACTTCCA CCTGCTGCGC TGGCAGGCCA AGTCGCCGCT GGAGCGCCCG CTGGTGGTGT TCACGCCCAA GTCGCTGCTG CGCCTGAAGG CCGCCACCTC GGCCGCCGCG GACTTCACCT CGGGCCACTT CGAGCCGCTG ATCAAGGACG ACTCGATCGC GCCGGACAAG GTGCGGCGCG TGGTGCTGTG CTCGGGCAAG ATCTACTACG ACCTGGACGC GGCGCGCCGC AAGAGCGGTG ACAAGCACAC CGCGATCATC CGGGCGGAGC GGCTCTACCC GCTGCCGATC GAGGAGATCC GCGAGCAGCT CAAGGCCTAC CCCAACGCGG GCGAGGTCCT GTGGGTGCAG GAGGAGCCGG CGAACATGGG CCCGTGGCCC TTCGTCGCGC TGGTCTTCTC CGAGCAGCTC GACCGCCCGT TCACCCGGAT CTCGCGTCCG GCCTCCTCCG CGCCCGCGGC CGGTTCGGCC AAGCGCCACG AGGCCGAGCA GCGGGCACTG GTGGACACGG TCTTCCCGCC CGCGGACTAG
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Protein sequence | MSSEASQPLT DFGPNEWLVE ELYQKYLNDP NSVDKAWWNF FADYKPAETA GAKGGSGAKA QGEKAPAASA PKKKPTAPAA PAPSAKPKSK DDKEGKDEAL QVKQERLRGA PARTATNMES SLGLPTATSV RAVPVKLLFD NRIVINNHLR RGRGGKVSFT HLIGYAMVKA LKALPEMNHS YVEVDGKPGV AKPEHVNFGL AIDLQKPDGS RQLVVPSIKK SDEMDFTEFW SGYEDLVRKA RSNKLGVPDF QGTTISLTNP GGIGTVHSVP RLMPGQGTIL GVGAMEYPAE FQGASSDTLA ELGISKVMTL TSTYDHRIIQ GAQSGEFLRR IHQLLLGEDG FYDEIFNSLR IPYEPVRWVQ DIHVNKATQL DKTTRVQELI HAYRVRGHLM ADTNPLDHEQ RKHPDLDVLE HGLTLWDLDR EFPTGGFGGK QVMKLRDVLG VLRDTYCRTV GIEYMHIQSP EEREWIQAHV EREHEKLDRD EQLHILHRLN SAEAFETFLQ TKYVGQKRFS LEGGESLIPL LDGVISKAAK AELDEAVIGM AHRGRLNVLA NICGKSYAQI FGEFEGNLDP RSAHGSGDVK YHLGTEGTFE THDGQKIRIS LAANPSHLET VDPVAEGIVR AKQDVLNKGP QGFTVLPILI HGDAAFAGQG VVAETLNLSQ LRGYRTGGTV HVIVNNQVGF TTSPSDSRSS VYATDVARMV QAPIFHVNGD DPEAVVRVAH LAFAYRQAFN KDVVIDLVCY RRRGHNEGDN PAFTQPLMYD VIDAKRSTRK LFTEALIGRG DITVEEAESA LRDYQSELER AFTETREVEK KPIEPGSVVK PEVFTEGRLE HSAVETAIST ETVKRVIDTQ VSLPEGFTPH PRLAPQLSRR ATMVETDAID WATGELLAFG SLLLDGHPVR LIGQDSRRGT FGQRHATLMD RETGETHTPL KQFDDGITRF HVHDSLLSEY AALGFEYGYS LTRPDALVMW EAQFGDFVNG AQTIIDEYIS AGEQKWGQRS SVTLLLPHGY EGQGPDHSSA RIERFLQQCA QENMTVAHPS TPASYFHLLR WQAKSPLERP LVVFTPKSLL RLKAATSAAA DFTSGHFEPL IKDDSIAPDK VRRVVLCSGK IYYDLDAARR KSGDKHTAII RAERLYPLPI EEIREQLKAY PNAGEVLWVQ EEPANMGPWP FVALVFSEQL DRPFTRISRP ASSAPAAGSA KRHEAEQRAL VDTVFPPAD
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