Gene Ndas_3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3654 
Symbol 
ID9247523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4384173 
End bp4385129 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003681559 
Protein GI297562585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC GCGTCAAGGA CCTGAAGGTC TACTACCAGA CCCTGCGCGG GGACGTCCAC 
GCCCTCGACG GCGTCACGTT CGACCTCGCC GACGGGGAGA TCATGGGCCT GGCCGGGGAG
TCCGGCTGCG GCAAGACCAC CCTGGGCAAG AGCCTGATCC GCCTGGACTC GCGGATGCGC
CACGTCGGCG GCACGATCGA GCTGGACGGC AAGGACGTGC CCATCGCCGA CGACCGCGCG
ATGGTGCCCC TGCGGTACCA CGAGATCTCG CTCATCCCGC AGTACGCGAT GAGCGCGCTC
AACCCGACCC GCAAGATCGG GAGGATGATC AACGAGCTGC TGCGCGCCCG CGGCGTGCGG
CCCGCCGACG TCACCGAGGA GCTCCACCGC CGCCTGGAGC TGGTCGGCCT GGACACCGAC
GTGCTCAACC GGTTCCCGAT CGAGCTGTCC GGCGGCATGA AGCAGCGCGT CGTCATGGTC
ATCTCGACCC TGCTCAACCC GTCGCTGCTG ATCGCCGACG AGGTCACCTC GGCCCTGGAC
GTGTCCACCC AGCGCTCCGT CGCGGAGTCG ATGGTGGAGT TCCGCGACCG GGGCTACATC
AAGAGCATGG TCTTCGTGAC CCACGACATC TCGCTCGTGT ACCAGATGGC GGACACGATC
ATGGTGATGT ACGCGGGCCA CATCGTGGAG AAGGCGGCCG CGGGCACCAT CATCAACGAG
CCCAAGCACC CCTACACCCA GATGCTCATC GGGGCGCTGC CCGAGGTCGG CTCCACCTCC
ACCGTGCAGG GGGGCCGCCT GGCGGGCATC CCCGGCACCC CGCCGGGTCT GCTCAACCCG
CCCACCGGCT GCCGGTTCAA GGACCGCTGC CCGATGGCGT TCTCCAAGTG CTCCGAAAAG
CCGCCGCTGG TGGAGATCGA ACCCGGCCAC TGGGCCGCCT GCTGGAAGAC GGGGTGA
 
Protein sequence
MTLRVKDLKV YYQTLRGDVH ALDGVTFDLA DGEIMGLAGE SGCGKTTLGK SLIRLDSRMR 
HVGGTIELDG KDVPIADDRA MVPLRYHEIS LIPQYAMSAL NPTRKIGRMI NELLRARGVR
PADVTEELHR RLELVGLDTD VLNRFPIELS GGMKQRVVMV ISTLLNPSLL IADEVTSALD
VSTQRSVAES MVEFRDRGYI KSMVFVTHDI SLVYQMADTI MVMYAGHIVE KAAAGTIINE
PKHPYTQMLI GALPEVGSTS TVQGGRLAGI PGTPPGLLNP PTGCRFKDRC PMAFSKCSEK
PPLVEIEPGH WAACWKTG