Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3648 |
Symbol | |
ID | 9247517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4376817 |
End bp | 4377608 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003681553 |
Protein GI | 297562579 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.87063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGAA GAATCCAGTC GATCGAACGC GCGGCAGCCA TTCTCCGGAT CCTGGCCACC GGCGCCCGCG GGCTCAGCCT GGCGGAGATC TCCCGGTCCC TGGAGCTGCC CAAGGGCACC GTGCTCGGCA TCCTGCGCAC CCTCCAGCAC GTGGGCTTCG TCGAGCAGGA CCCCGAGTCG GGCCGCTACC GCCTGGGCGG GGGCATGCTC AGCCTGGGCA CCCGCTACCT GGACGGCAAC GAACTGCGCA CCCGCGCCCT GAACTGGGCG GACAGCCTGG CCTCGCGCAG CGGTGAGAGC GTGCGGATCG GCACGCTGCA CAAGCACCAG GTGCTCGTGG TCCACCACGT GTTCCGTCCC GACGCCTCCC AGCAGACCCT GGACGTGGGC ACCCTGCTGC CGCTGCACGC CACCGCCATC GGCAAGGTCA TCATGGCCTT CGACCCCCTG GCGGCCCCCG AGGAGGACCC GGCCGTGGTC GAGAGCGGCG GGGCCCCGGC CCTGACCTCC TTCACCCGGC ACACCGTCAC CTCCCCCGCC GCGCTGGAGC GCCAGCTCGA CCAGGTGCGC GACGACGGCT GGGCGTGGGA GGCCGAGGAA CTCGTGGACG GCGAGGTCTC CATCGCCGCC CCCATCCGCG ACCGGCGCGG CACGACCGTC GGCGCCATCG GGGTGCGCGG CGCCGTCGAG CGCCTGCGCG GCGAGGGGGG CAGGCCCGAC ATGGAGCAGG TCTCCTACGT GCGCGACGCG GCGCGGGCCA TCTCCCGGGA ACTCGGCGTC ACCCCCTACT GA
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Protein sequence | MPGRIQSIER AAAILRILAT GARGLSLAEI SRSLELPKGT VLGILRTLQH VGFVEQDPES GRYRLGGGML SLGTRYLDGN ELRTRALNWA DSLASRSGES VRIGTLHKHQ VLVVHHVFRP DASQQTLDVG TLLPLHATAI GKVIMAFDPL AAPEEDPAVV ESGGAPALTS FTRHTVTSPA ALERQLDQVR DDGWAWEAEE LVDGEVSIAA PIRDRRGTTV GAIGVRGAVE RLRGEGGRPD MEQVSYVRDA ARAISRELGV TPY
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