Gene Ndas_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3648 
Symbol 
ID9247517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4376817 
End bp4377608 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003681553 
Protein GI297562579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.87063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGAA GAATCCAGTC GATCGAACGC GCGGCAGCCA TTCTCCGGAT CCTGGCCACC 
GGCGCCCGCG GGCTCAGCCT GGCGGAGATC TCCCGGTCCC TGGAGCTGCC CAAGGGCACC
GTGCTCGGCA TCCTGCGCAC CCTCCAGCAC GTGGGCTTCG TCGAGCAGGA CCCCGAGTCG
GGCCGCTACC GCCTGGGCGG GGGCATGCTC AGCCTGGGCA CCCGCTACCT GGACGGCAAC
GAACTGCGCA CCCGCGCCCT GAACTGGGCG GACAGCCTGG CCTCGCGCAG CGGTGAGAGC
GTGCGGATCG GCACGCTGCA CAAGCACCAG GTGCTCGTGG TCCACCACGT GTTCCGTCCC
GACGCCTCCC AGCAGACCCT GGACGTGGGC ACCCTGCTGC CGCTGCACGC CACCGCCATC
GGCAAGGTCA TCATGGCCTT CGACCCCCTG GCGGCCCCCG AGGAGGACCC GGCCGTGGTC
GAGAGCGGCG GGGCCCCGGC CCTGACCTCC TTCACCCGGC ACACCGTCAC CTCCCCCGCC
GCGCTGGAGC GCCAGCTCGA CCAGGTGCGC GACGACGGCT GGGCGTGGGA GGCCGAGGAA
CTCGTGGACG GCGAGGTCTC CATCGCCGCC CCCATCCGCG ACCGGCGCGG CACGACCGTC
GGCGCCATCG GGGTGCGCGG CGCCGTCGAG CGCCTGCGCG GCGAGGGGGG CAGGCCCGAC
ATGGAGCAGG TCTCCTACGT GCGCGACGCG GCGCGGGCCA TCTCCCGGGA ACTCGGCGTC
ACCCCCTACT GA
 
Protein sequence
MPGRIQSIER AAAILRILAT GARGLSLAEI SRSLELPKGT VLGILRTLQH VGFVEQDPES 
GRYRLGGGML SLGTRYLDGN ELRTRALNWA DSLASRSGES VRIGTLHKHQ VLVVHHVFRP
DASQQTLDVG TLLPLHATAI GKVIMAFDPL AAPEEDPAVV ESGGAPALTS FTRHTVTSPA
ALERQLDQVR DDGWAWEAEE LVDGEVSIAA PIRDRRGTTV GAIGVRGAVE RLRGEGGRPD
MEQVSYVRDA ARAISRELGV TPY