| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3644 |
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| Symbol | |
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| ID | 9247513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 4369026 |
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| End bp | 4374248 |
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| Gene Length | 5223 bp |
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| Protein Length | 1740 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_003681549 |
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| Protein GI | 297562575 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.511908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.240887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGAGCG GAACCGGTCG TCGTTTCTTC CTTGCCGTCG GTGTTTCCAG GTACCAGCAC
CTGTCCAGAG AGGAGCAGCT GACCGGGGTC GGAGAAGATG TTCTCGCCGT CCGGAACCTG
TTCACCGGCT TCGGCTACGA ATCCGTTCTG GAGGGGATCG GCGACTACGG GAGCGCCAAC
GACATCCGCG AGAAGATCCG CCGCTGGGTC GCCGATGTCG AACTGGGCGA GGAGGACGTC
GTCGTCCTGT ACTTCGCGGG CCACGGATAC GCGCCCGACC GGGACCGGCA CTACCTGTGC
TGCTGGGACA CACGCGAGGA CACCCCCGCC TCGACCGCCC TGGCCACCGA GGACCTGGTC
CGGATCCTGT GCGAGGGGCG GCTGCGCAGG CTGCTGCTGA TCCTGGACAC CTGCGCGGCC
GGGGCGGGCG CCTCCGACGC GGCCGGGATC GCGCTCAACA CCCTCGCCTA CCGCCTCACC
GGCGGCGACG TGTCCACCTC GGTGTGCTTC CTGTCCTCCG CGCGCGCCAA GGACCTCGCC
CAGGACGGGG CCTTCGCGCC CGCGCTGCGC GAGGCCGTGG AGACGGCCAC CGAGCGGGCG
GGCCAGCGCC AGCCCTACCT CGACCTGGCC TCCGTCGTCC AGCACGTCAA CGACCACTTC
GCCGAGAACG GCGTCCCCCA GCGCGCCGAG CTGGCCAAGG GCGCGGGCAC CGGCCTGGAC
CCCTTCCTGC CCAACGACTC CTACCGCGCC GACCTGCCCT CGGAGGGCAC CGACCTCGAC
TTCCAGCGCC AGGCGGCCGA ACTGGCCGAG CACTACGGCC CGCGCTCGCG CGGCGTGGAG
TTCGAGTCCG AGCAGGGCCG CTACTTCAGC GGCCGGGAGT GGGTCCTGCG CGACCTGGTC
TCCTGGATGA CGTCGCCGGA GGGCGACGGG CGGGGCCGCA TCGTGACCGG CAAGCCCGGC
TGCGGCAAGT CGGCGGTGCT GGGCCGGGTC GTCACCGTGT CCGACCGCGA GTACCGCGAG
CGGCTGGGGC TCGCGGAGTC CTCCGACGAC ACCCTCGTCC CCGTGGGGAC GGTGACCGCC
GCGGTCCACG CCCGGCACAA GCGGCTGGAG GAGATCGTCG AGCGCGTCTC CACTGCGCTC
GGCTCCCGGG CGCGGACCCC CTCGGCGGCC GGGCTCCTCC AGGAGCTGGC CCAGCGCGCA
CGGGTCAGCG AACGGCCCCT CGTCATCGTC GTCGACGCCC TCGACGAGGC GGGCTCGGCC
AGCACGGCCG ACTTCGTGGG CCGCGGTGAG CCGCGCCGGA TCGCCCGCGA GCTGCTGCGG
CCCATGGCCG AGATCCCCGG GGTGCGGCTC CTGGTCGGCA CCCGCCGCGA GCTGGTCAGG
GCGCTGGAGT CGGTGATGAC CGTCATCGAC CTGGACACCC ATCCCGCCGA CACCGAGGCC
GACATCCGCG GCTACGTGCG CCAGGTGCTG CTCGCCTCCG ACGAGGCCGA CACGCGCACC
CCCTACCGGG ACAGGCCCGA GCTGGCCGAC CGGGTGGCCA GGGGAGTGGC GGGCCGCGCG
GCCGGGGTCT TCCTGGTCGC CCGGCTCACC GCCCGCAGCC TGCGCAAGGA GCCGACCCCC
ATCGACACCT CGGTGTCCGG CTGGCAGAGG ACCCTGCCCA GCGGGGTCGG CGAGGCCTTC
GACGACTACC TGGCGCGCTT CGGTGAGGAG GAGGACCGGG TGCGGCGCCT GCTCACCCCG
CTGGCCTTCG CCGAGGGCCA GGGGCTCCCC CGGGGGAGCA CGTGGGCGGC GATGGCCGCC
GGCCTGTCGG ACGCGGAGTG CTCCGACGCC GACATCAGCG AGGTCCTGCG CTTCGCCAGC
GACTACGTCG CCGAGGTGGT GGAGGGGGAG CGGTCGGTGT ACCGCCTCTA CCACCAGGCG
CTCGCCGACC ACCTGCGCGC CTCCTACAAC GGCCGCGGGG ACGCCACCCG CGCGCAGGAG
CGGATCGTGG CAGCGCTGCT GGGGACCGTG CCGGGCCGCC TGGACGGCCA GGGGCCGGAC
TGGTTCTCGG CCTCCGCCTA CGTCCGCGCG CACCTGGCCA CGCACGCCTC CGACACCGGG
CACCTCGACG CGCTGGTGGC CGACCCGGTG TTCCTGCTGG CGGCCGGTCA GCTCCCCCTG
ATGCGGGTGC TGGGCAGGGT CTCGGGTGAG GAGGCGCAGG CGGCCCGCAC GGCCTACGAA
CAGGTCGCCC ACCGGCTGTC GGAGAGGTAC CCGCTCAAGG ACCGCACCTC CGACCTCCAG
CTGTCGGCCC GGCGCTGCGG CGCCGACGCG CTCGCGGAGC GGATCGACAA GTCGGGCCTG
CCGTCCACGT GGACCACGCG GTGGGCGTGG TGGTCCACCA GCGGCGCGCA CCGGCAGCTG
GTGGGGCACA CGAAGGAGGT CGTGTGCGTG GCCACCACGG CGCTGGACGG GCACCGCGTC
GCGGTCACCG GCAGCGCCGA CAGGACGGTG CGGATCTGGG ACCTGAGCAC CCAGAGCCAG
TTGGGCGACC CGCTGGCGCT GCCCGTCAGG CCCACCTGCC TCACCCTGGG GGAGTTGGAC
GAGTACTCCG TCGCCCTGGT CGGAGGCATC GACGGACGTC TGCGGATCGT GGACCTGTCC
ACCAGCCGGG TCCTCGGTGA GCAGTGGGAG GCACACACCA ACCTCGTCAC GGACGTGGCC
ATGGCGACCT TCCGGGGCAG GACCTTCGCG CTGACGTCGA GCCAGGACGG GACCGCCCGG
CTCTGGGACC TGGACACCCG GAGTCCCCTG GGAGGGCCGC TGGCCGCACA CCGCAGCTCG
GTCAACGCCG CGGCCCTCGC CCCCGTGGGG GACCGGCTGC TGGGGGTCAC GGGCGGGACC
GATCGCAGGG CCTACGTCTG GGATCTGACC GCGCTGCTCG ACGATCCGCG CGCGGAAGTG
CTCGGTGACG CGTTCGTCGC GCACACGGCG GAGGTGTCGA CGCTCCTCCT CACGGACACC
CCCGAGGGGC CCGTGGTCCT CAGCGGTGAC GAGGAGGGGA TGCTCAACCG CTGGAACCCG
CTGAACCGGC AGCAGATCGG TGAACCCACT TCCGTGCACC CCCATGTCAT GCCTGTCCGG
GCGGGTGTCA GGTCCATCGA CGCGGGCGGG TTCGGTGAAC GGAGGGTGGT CCTGACCAGC
GGGTGGGAGG ACGCGCGGGT GTGGGACCTG GAGACCATGC GCCAGCAGGG CCACCCCCTG
CGGGGGCACA CCCAGGCGCT GAACCAGGCG GTTCTGACCT CGCAGGCGGA CGGCGTCTTC
GCCGTCACCG TCAGCGATGA CCGGACCGCG CGGGTGTGGG ACCTGGCCGC GGACCAGCCC
GAGACCGGGC ACGTCGAGAC CATCAACGCC GTCACCGCCG CGGTGCACGC GGGGCAGTCC
TACGCGGCGA CCGGCGGGGC CGAGGGCATG CTGTGCGTCT GGGACCTGGA GGAACTCCGG
GGGATCGCCC GGCCGCTGGA GAGCCACCAC GGCGCCATCC GGGCGGTGGC GATGACCTCG
GTGGACGGCG ACCTGGTCGC GGTCACCGGA GGGGACGACA CGAGTCTGCG GGTCTGGCAT
CCCCTCCGGG GACGCGAGTG CGTCCGACAC CTCACCGGAC ACACCAACGC GGTCACCTGC
CTCCAGACGG TGGAACTGAA CGGCCGCTCC CTGGTGGTCA GCGGGAGCGA GGACGGAACC
ATCCGCCTGT GGGACCTGGG CACGGGCGCC GATGTCGTCA GCCCCCTCAC CGGGCAGATC
GGCGGCATCC ACGAGATGCG GGCCCGGGTG GACGCGGGGG TACTGCGCCT TCTCGTCCGG
ACGACGCAGG ACTACCTGTA CCTCTGGTCC TGGGAGGGGC GGCCCGCCAC CCTCCCGGAA
CGCGTGGTCG GACGCGAGTC ATGGGACGAG GCGCTGGACA GGGGCACGAT CGGTATCGGT
TTCGTCCGGG GGACTCCCGT GGCCCTGACC ACGAGCGGGG CCAACGACCT GTGCTGTTAC
TCCGTCGAAC ACTGGCAGCC GGTCGGCCGT GCCCTGGAGG GGTGGGGCGT CCAACTGCTG
AACTTCGGCG CCCGGGTCAC CAACGACGGC CACACCGCGG TACTGGACGC GGACAGGAGG
CTCCACCTGG GCGACCTGCT CGCGGGAGAG CGGCTGGGAA GGCCCCTGTT GTCCAGCGAG
AACGGGCTGA TCAAGGGCGT CTTCACGGAG ACCGCCACGG GGCTCGGGTT CCTGTCCGTC
CAGAACGCGC AGGCGCGCCT GTGGGACGTG GCCACGACCA GTCCGGTCGG AGAGGCCTTC
TCCGGCCTCG ACCACCAGCT GCGAGGGGTG TCCGTCGACG GTGCCCAGGG GAGGGTGCAC
ACCATGGGGG CGGACGGGAC GTTGCGCGCC CACGACGCGG ACACCGGGCA CCTGGCCCAT
CCCCTGCTCA CCAGCCAGGA GCGCGGCTCA CGTCTGTGCC GGGTCTCGGA CACCACCCAC
CTCGTGCAGA GATGGCGGTG GATGGAGTTG GTCGACACGG CCGCCGGGGA GGCGGTCGCC
TCCTTCCACG AGCAGGACCT GGCGCCGTTG ACGGAGTTCG CGGTACACGA CCTGGACGGC
CGGACCGTCG TGGTCACCAC GGGCAAGGAC GCCCGCCTCC ACGTGTGGGA CCTGGCCGAG
CGCACGCGTG TCGGGGAACC GCTGGGAGGG CACACCGCGA TCGTGCGCAA CATCCGTACC
GTGCGCATCG GTGACCGGCA CCTGCTCGCC AGCGCGTCCG CCGACGGCAC GGTCCGGGTG
TGGGACCTGC GGACCCGAGA ACCGGTCGCT GGGCCGTTCG GCGACGCCGG GACACGGTTG
CGCGCGGTGG ACATCGCCGA CACCGGGGAC GGAGGACTGC TCGTCGGTGG CGGCGACAAG
GGCCCCCTCC TCGCCTGGAA CACACGGAAC TGGTCGCGTA CCGCACTGCC GGTACCCGAC
CTCGTCGACG GGGTTCGGAC GATCCGCATC GCCCGGGTCG CCGGTGTCCC GCTCGTCGTC
GTCTCCGACC TCCAGGGTGT GATCCGCGCC TGGAACCACG CGGCCGGGAC CATGGTCGGG
GAGATCGGTG TGGGCAGTCT GGTCCACGAC CTCTCGGTCA CCCCGGACGG GAACCTCTAC
GCCGCCACCG ACTCCGGCCT CGTCGCCCTC CGCCTCAACA CGGACTCACT CACCCGCCTC
TGA
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| Protein sequence | MPSGTGRRFF LAVGVSRYQH LSREEQLTGV GEDVLAVRNL FTGFGYESVL EGIGDYGSAN
DIREKIRRWV ADVELGEEDV VVLYFAGHGY APDRDRHYLC CWDTREDTPA STALATEDLV
RILCEGRLRR LLLILDTCAA GAGASDAAGI ALNTLAYRLT GGDVSTSVCF LSSARAKDLA
QDGAFAPALR EAVETATERA GQRQPYLDLA SVVQHVNDHF AENGVPQRAE LAKGAGTGLD
PFLPNDSYRA DLPSEGTDLD FQRQAAELAE HYGPRSRGVE FESEQGRYFS GREWVLRDLV
SWMTSPEGDG RGRIVTGKPG CGKSAVLGRV VTVSDREYRE RLGLAESSDD TLVPVGTVTA
AVHARHKRLE EIVERVSTAL GSRARTPSAA GLLQELAQRA RVSERPLVIV VDALDEAGSA
STADFVGRGE PRRIARELLR PMAEIPGVRL LVGTRRELVR ALESVMTVID LDTHPADTEA
DIRGYVRQVL LASDEADTRT PYRDRPELAD RVARGVAGRA AGVFLVARLT ARSLRKEPTP
IDTSVSGWQR TLPSGVGEAF DDYLARFGEE EDRVRRLLTP LAFAEGQGLP RGSTWAAMAA
GLSDAECSDA DISEVLRFAS DYVAEVVEGE RSVYRLYHQA LADHLRASYN GRGDATRAQE
RIVAALLGTV PGRLDGQGPD WFSASAYVRA HLATHASDTG HLDALVADPV FLLAAGQLPL
MRVLGRVSGE EAQAARTAYE QVAHRLSERY PLKDRTSDLQ LSARRCGADA LAERIDKSGL
PSTWTTRWAW WSTSGAHRQL VGHTKEVVCV ATTALDGHRV AVTGSADRTV RIWDLSTQSQ
LGDPLALPVR PTCLTLGELD EYSVALVGGI DGRLRIVDLS TSRVLGEQWE AHTNLVTDVA
MATFRGRTFA LTSSQDGTAR LWDLDTRSPL GGPLAAHRSS VNAAALAPVG DRLLGVTGGT
DRRAYVWDLT ALLDDPRAEV LGDAFVAHTA EVSTLLLTDT PEGPVVLSGD EEGMLNRWNP
LNRQQIGEPT SVHPHVMPVR AGVRSIDAGG FGERRVVLTS GWEDARVWDL ETMRQQGHPL
RGHTQALNQA VLTSQADGVF AVTVSDDRTA RVWDLAADQP ETGHVETINA VTAAVHAGQS
YAATGGAEGM LCVWDLEELR GIARPLESHH GAIRAVAMTS VDGDLVAVTG GDDTSLRVWH
PLRGRECVRH LTGHTNAVTC LQTVELNGRS LVVSGSEDGT IRLWDLGTGA DVVSPLTGQI
GGIHEMRARV DAGVLRLLVR TTQDYLYLWS WEGRPATLPE RVVGRESWDE ALDRGTIGIG
FVRGTPVALT TSGANDLCCY SVEHWQPVGR ALEGWGVQLL NFGARVTNDG HTAVLDADRR
LHLGDLLAGE RLGRPLLSSE NGLIKGVFTE TATGLGFLSV QNAQARLWDV ATTSPVGEAF
SGLDHQLRGV SVDGAQGRVH TMGADGTLRA HDADTGHLAH PLLTSQERGS RLCRVSDTTH
LVQRWRWMEL VDTAAGEAVA SFHEQDLAPL TEFAVHDLDG RTVVVTTGKD ARLHVWDLAE
RTRVGEPLGG HTAIVRNIRT VRIGDRHLLA SASADGTVRV WDLRTREPVA GPFGDAGTRL
RAVDIADTGD GGLLVGGGDK GPLLAWNTRN WSRTALPVPD LVDGVRTIRI ARVAGVPLVV
VSDLQGVIRA WNHAAGTMVG EIGVGSLVHD LSVTPDGNLY AATDSGLVAL RLNTDSLTRL
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