Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3609 |
Symbol | |
ID | 9247478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4325798 |
End bp | 4328254 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003681515 |
Protein GI | 297562541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCTC CCCGCCACAA CCTGCCCCTG TCCGCCGGCG AGTTCATCAG CTTCGTCGGA CGCGAGCGCG ACATCGTCGA CCTGGGCCGC CTCCTGGGCA CCGCCCGGAT GGTCACGCTG ACCGGTACCG GCGGTATCGG CAAGACGCGC CTGGCCCTGC ACCTGGCCGA ACGCGTCATG CGCCGGTTCC CCGACGGCGT GCGCTTCGTC GACCTGAGCG AGGCCTCCAC CCACGACCAG GCGCTGCGCG CGGTCGCGGG CAGCCTCCAG GCGGTGCAGG ACGACTCGCG CACCATGACG GACGCCGTCA TCACCTCGCT GCGCACCCGC AACCTGCTGC TGCTCCTGGA CACCTGCGAG CACGCCGTGG GGCCGATGGC GCAGCTGTGC CAGGCCGTGC TGCGCGACTG CCCCCGGGTG CGCATCCTGG TGACCAGCCG CCAGCCCCTG CACGTTCCCG AGGAGAACAT CTGGCGGGTG CCGCCGCTGT CCCTGCCAGC GCGGCCCACC CCCACCGACC CCTACGCGGC CGACCCCGCG CCCATCCCCC GGCGCGACAC CCAGCGCTAC GAGTCGGTGC GCCTGTTCGT GACCCGCGCG CACGCCGCGC GCGCCGGGTT CGAGATGACC AGGGAGAACT CCGGTTACAT CGCGGAGATC TGCCGGATGC TGGACGGCAT GCCGCTGGCG ATCGAGCTGG CCGCCGCACG GGTGCGGGTG CTGTCGGTGC AGCAGATCCT GCGCCGCCTG GACGACCGCT TCCAGCTGTT GACCAGCGAC GGGTCGGAGG ACCTGCCGCC GCGCCAGCGG ACGCTGCGCG CGGTCCTGGA GTGGAGCCAC GAACTGCTCA CCGAGCCGGA GCGGCTCCTG CTGCACCGGT TGTCGGTGTT CTCCACCTGG TACCTGGAGG CCGCGGAGGA CGTCTGCTCG GGCGAGGGGG TCGATCCCGC CGACATCCTG CCGCTGCACT TCTCCCTGCT GGACAAGTCG CTGGTGGTGA TGGACGCCGA GGTCGACGGC ACCACCCACT ACCGGCTGAC CGAGACGGTG CGCGCCTACG CCGCCGAGCA CCTGGCCGAC AGCGGCGGCG AGGACGACCG GTGGGAACGC TACCTGCGCT TCTGCGTCGC CCGTCTGGAG GAGTGGGCCA AGAGCTGCTG CGCGCCGATG CCGTGGGGGG AGCGCCTGGG GCACCTGCGG CTGCTCGACC ACCACCGGGA GAACCACGCC CGTGTGGTGG ACTGGGCGCT CTCGCGCGGA CGCGTGGACG AGGCCCTGCG GGTGTGCGTG GCGCTGCGCT CCTACTGGAT CGTGCGCGAC CTGGCCGCCG AGGGCAGCCG CCTCCTGGAG CGGGCGCTGT CCACCGACTC CGACGCGCAG TCCCCCCACC TGCGGGCGCG CGCCCTGGCC CTGCACGCCG AGCTGCGGCT GGACCTGGAC GCGGCGCCGC GCGTGTCCAC CCTGGCCCTG TGCGCCCTGG AGTCGGCGCG GGCCTGCCGT GAGGCGGGAG CCGCCGCCTC CGCGCTGGCC ACCCTGGCGG CGCTGTGCCT GCGCACCGGC ACCCTGGACG AGGGCCAGGA GCACGCCGAG CGGGCCGGGG TGTGGGCCTC CCAGGTCAGC GACCCCATCA CCGAGGCGGC CACGCTGGAC GTGCTGGCCC AGCTGGCCCG CCGCCGCGGC GAGGCCGAAC GGGCCACGGC CCTGCTGGAG CACAGCGTCG CGGTGGCCGA CAACCTCGGC GACCGCTGGA GCGCGGCCCG CGCCCTGCAC GGGCTGGGCT CGATCGCCGC CGAGCGCGGC GACTTCACGC GGGCGCGGGA GCTGTTCTCC GACGCCCTGT CGGTCTTCGG CGAGCTGGAG GCCGCCCCGG CCACCGCGCA CTGCGCCCGG GAGCTGGGCC GCCTGTACCT GGCCGAGGGC GAGACGCTGC TCGCCCGGGA GCCCCTGGCG ACGTGCCTGC GGGTGAGCTT CACCTCCGGC CGCAGGCTCG CGGTGGCCCG GGCCCTGGAG GCGCTGGCGG AGCTGGCCCT GGCCGAGGAG GAGGCCGAGC GGGCCGCCGC CCTGGTGGGG GTGGCCGCCG ATCTGAGGGC GGCGCTGGAC CGCCCCTCGG CCGAGACGCT GCGGCTGCGG TCGGCGGCGG AGCGGCGCGT GGGCGCCACG CGCACCGCCG AGGCGTGGAA CGCGTGGCGC CCCCTGCCGC TGGAGCAGGT GCTCGACCGC GCGCTGGCCT TCCCCCGGCC GCAGTCCTCG GGGCCCTCGG GCCCGGATTC GCTGACCCCC CGGGAGAGGG AGGTGGCCGA ACTGGCCGAA GAGGGCCTGT CCAACCGCGA GATCGCCGAG CGGCTGACCA TCAGCCACGC GACGGCGGCC CGCCACATCG CGAACATCTT CAGAAAACTC TCGATTTCCT CCAGGACGCA GTTGACCGGC TGGGCCGTCC CGGGTGACGG TGGCTGA
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Protein sequence | MSPPRHNLPL SAGEFISFVG RERDIVDLGR LLGTARMVTL TGTGGIGKTR LALHLAERVM RRFPDGVRFV DLSEASTHDQ ALRAVAGSLQ AVQDDSRTMT DAVITSLRTR NLLLLLDTCE HAVGPMAQLC QAVLRDCPRV RILVTSRQPL HVPEENIWRV PPLSLPARPT PTDPYAADPA PIPRRDTQRY ESVRLFVTRA HAARAGFEMT RENSGYIAEI CRMLDGMPLA IELAAARVRV LSVQQILRRL DDRFQLLTSD GSEDLPPRQR TLRAVLEWSH ELLTEPERLL LHRLSVFSTW YLEAAEDVCS GEGVDPADIL PLHFSLLDKS LVVMDAEVDG TTHYRLTETV RAYAAEHLAD SGGEDDRWER YLRFCVARLE EWAKSCCAPM PWGERLGHLR LLDHHRENHA RVVDWALSRG RVDEALRVCV ALRSYWIVRD LAAEGSRLLE RALSTDSDAQ SPHLRARALA LHAELRLDLD AAPRVSTLAL CALESARACR EAGAAASALA TLAALCLRTG TLDEGQEHAE RAGVWASQVS DPITEAATLD VLAQLARRRG EAERATALLE HSVAVADNLG DRWSAARALH GLGSIAAERG DFTRARELFS DALSVFGELE AAPATAHCAR ELGRLYLAEG ETLLAREPLA TCLRVSFTSG RRLAVARALE ALAELALAEE EAERAAALVG VAADLRAALD RPSAETLRLR SAAERRVGAT RTAEAWNAWR PLPLEQVLDR ALAFPRPQSS GPSGPDSLTP REREVAELAE EGLSNREIAE RLTISHATAA RHIANIFRKL SISSRTQLTG WAVPGDGG
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