Gene Ndas_3608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3608 
Symbol 
ID9247477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp4324052 
End bp4325386 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content70% 
IMG OID 
Producthistidyl-tRNA synthetase 
Protein accessionYP_003681514 
Protein GI297562540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC AGCGCGTCGT CCGACCCACT CCCATCAGCG GTTTCCCCGA GTGGTCCCCT 
CAGGTCCGGG CCGTGGAGCA GCGCTGGCTG GACCATATCC GCGCCGGGTT CGAGTCCTTC 
GGCTTCGCGT CGGTGGAGAC GCCGTCCGTG GAGAACCTCG ACGTGCTGAT GGCCAAGGGC 
GAGACCTCCC AGGAGGTCTA CACCCTGCAC CGCCTCCAGG CCGACGCCAA GGACGACTCC 
GACGCCAGAC TCGGGCTGCA CTTCGACCTC ACCGTGCCCT TCGCCCGGTA CGTCGCCCAG 
CACTTCAACG AGCTGGCCTT CCCCTTCAAG CGCTACCAGA TGCAGCGCGT GTGGCGGGGC 
GAGCGCCCCC AGGAGGGGCG CTTCCGGGAG TTCACCCAGT GCGACATCGA CGTCATCAAC 
GTCGACTCCG TCCCGCTGCA CTTCGACGCC GAGCTGCCGC GCATCGTGCA CCGGGTGCTC 
AGCGGGCTGG ACCTGCCCGC ATGGACGCTC AACGTCAACA ACCGCAAGGT CCTCCAGGGC 
TTCTACGAGG GCCTGGGCAT CAAGGACCCG ATCGCGGTCA TCCGCGCCGT GGACAAGCTG 
CACAAGATCG GCGACGACGG CGTGCGCCAG ATCCTGCTGG CCGACGGCCT GACCGACGAG 
CAGGCCGACG CCTGCCTCGC GCTGGCCCGC GTCCGGGGCG CCGGGACCGG CGTCGCCGAG 
CGGGTCCGCG GGCTCGGGGT CTCCTCCGAG CTGCTCGACG AAGGGCTGGA GGAGCTCTCC 
TTCGTGCTGG AGGACCTGGC CGACCTGCCC GAGGGCAGCG TCGTGGCCGA CCTGTCCATC 
GCCCGCGGCC TGGACTACTA CACGGGCACG GTCTACGAGG CCTCCTTCGA CGACGACCCC 
GGCTACGGGA GCATCTGCGC GGGCGGGCGC TACGACGACC TGGCCGGGCA GTTCATCCGC 
AGGCGGCTGC CGGGCGTGGG CATCTCCATC GGCCTCACCC GCATCTTCGC CAAGCTCGTC 
GCCGAGGGCC GGATCGAGGA GGGGCGCGCC TGCCCCACCG ACGTGATGGT CGTGGTGCCC 
GGCGCCGAGC GCCGCAGGGA GGCCCTGCTC ACCGGGGAGC TGCTGCGCGG GCGCGGGTTC 
AACACCGAGG TGTTCCACTC CACCGCCAAG GTCGGCAAGC AGATCCAGTA CGCCGCCAAG 
AAGGGCATCC CCTTCGTGTG GTTCCCGCCC TTCGGCGAGG ACGGCGGCCA CGAGGTCAAG 
GACATGGGGT CGGGGGAGCA GGGTCCGGCC GACCCCGCCA CCTGGGCCCC GAAGGGCACG 
GAAAGCGCGG AGTAA
 
Protein sequence
MSDQRVVRPT PISGFPEWSP QVRAVEQRWL DHIRAGFESF GFASVETPSV ENLDVLMAKG 
ETSQEVYTLH RLQADAKDDS DARLGLHFDL TVPFARYVAQ HFNELAFPFK RYQMQRVWRG 
ERPQEGRFRE FTQCDIDVIN VDSVPLHFDA ELPRIVHRVL SGLDLPAWTL NVNNRKVLQG 
FYEGLGIKDP IAVIRAVDKL HKIGDDGVRQ ILLADGLTDE QADACLALAR VRGAGTGVAE 
RVRGLGVSSE LLDEGLEELS FVLEDLADLP EGSVVADLSI ARGLDYYTGT VYEASFDDDP 
GYGSICAGGR YDDLAGQFIR RRLPGVGISI GLTRIFAKLV AEGRIEEGRA CPTDVMVVVP 
GAERRREALL TGELLRGRGF NTEVFHSTAK VGKQIQYAAK KGIPFVWFPP FGEDGGHEVK 
DMGSGEQGPA DPATWAPKGT ESAE