| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3568 |
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| Symbol | |
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| ID | 9247437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 4279126 |
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| End bp | 4280358 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | |
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| Product | Lycopene beta and epsilon cyclase |
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| Protein accession | YP_003681475 |
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| Protein GI | 297562501 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.579585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACT ACGACGTGGC GATCATCGGC GGGGGAGCCG CTGGGCTCAC CCTGACCCAC
CAGCTTCGCG GGGTCAATGA CCGACGTGGC CGACCGCTGC GGGTCGCCCT GGTGGAACCG
CCCCCCGGGC CGCACACCCC TCCGCCCCGC ACCTGGTGCT TCTGGGAGCC CGACGGCGGG
CCGTGGGACC ACCTGCTGGC CGCCCGCTGG AGGGACCTGT CCGTGGTGGG GCCGGACGGG
GCCGTCCACG ACTCCCCGGC GGCGCCCTAC GTGTACAAGA TGCTGCGGTC GGCCGACGTG
GACGCGCATG TGCGCGCTTC GGCCGGTGAA CACGTGGACC AGCTTCCGGT GCTGGTCACC
GAGGTCGTCG ACGGCGTCGA GCACGCCGTG GTACGGGGCA CCTGCCCCGG AGGCCCCGGG
GGAGGGGAGC GGGAGCTGAC CGCCTCATGG GTGTTCGACT CGCGTCCGCC CCGGCCCGCC
CCGCGCGGGC GCACGCACCT GCTCCAGCAC TTCCGCGGCT GGTTCGTGCG CACGCCCGAC
GACGCCTTCG ACCCCGCCTC GGCCGTGCTC ATGGACCTGC GCCCTCCCCA GCCGGCCAAC
GGCGTGGCCT TCGGCTACGT GCTGCCGCTG TCGCCGCGCG AGGCGCTGGT GGAGTACACC
GAGTTCGGGC GCGAGGCGCT CACGACCCCC GAGTACGAGC GCGCGCTCGA GGACTACTGC
GGCCTGCTCG GGCTGGGGGA CGTGGAGGTG ACCGCGGCCG AGCAGGGCGT CATCCCGATG
ACCGACGCGC GGTTCCGCCC CCGCGCGGGG CGGCGCGTGT TCCGGGTGGG GACGGCGGGC
GGCGCCACCC GGCCCTCGAC CGGGTACACG TTCAGCGGTG TGCGGCGCCA GACGGCCGCC
GTGGCGCGGG CGCTGGCCCA GGGGCGGGCC CCGGTACCGC CGGTGCCCCA CCGCCGCCGC
CACCTGGCGA TGGACGCGGT CATGCTGCGG GCCCTGGACA CGGGGCGGGT GCGGGGAGCG
GAGTTCTTCG CCGGGCTGTT CGCGGCCAAC CGCCTCGGGG ACGTGCTGGC CTTCCTGGAC
GGTGGCTCGC GCCTGCCCCG GGAACTGGCG ATGGGCCTGA GCACACCGGT CGCGGCCATG
TCGCTGACCA GCCTGGACCA GGCGTGGTAC GCGCTGCGCG GGGTCGGTGC GAGGAGCCTC
AGCCGGGGGC CAGGGCCCGC ACGGCGTCGG TGA
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| Protein sequence | MADYDVAIIG GGAAGLTLTH QLRGVNDRRG RPLRVALVEP PPGPHTPPPR TWCFWEPDGG
PWDHLLAARW RDLSVVGPDG AVHDSPAAPY VYKMLRSADV DAHVRASAGE HVDQLPVLVT
EVVDGVEHAV VRGTCPGGPG GGERELTASW VFDSRPPRPA PRGRTHLLQH FRGWFVRTPD
DAFDPASAVL MDLRPPQPAN GVAFGYVLPL SPREALVEYT EFGREALTTP EYERALEDYC
GLLGLGDVEV TAAEQGVIPM TDARFRPRAG RRVFRVGTAG GATRPSTGYT FSGVRRQTAA
VARALAQGRA PVPPVPHRRR HLAMDAVMLR ALDTGRVRGA EFFAGLFAAN RLGDVLAFLD
GGSRLPRELA MGLSTPVAAM SLTSLDQAWY ALRGVGARSL SRGPGPARRR
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