Gene Ndas_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3552 
Symbol 
ID9247421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4262577 
End bp4263452 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content77% 
IMG OID 
ProductCytochrome c oxidase caa3-type, assembly factor CtaG-related protein 
Protein accessionYP_003681459 
Protein GI297562485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.223965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.817267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCACC GCGGGCACGA ACCCGCCACC GCGGTCCCCG GCCTCCTCGC TCCCGGCGCG 
TGGGCCGTCC TGGCACTGGT GTGCGCGGCC CTGGCGGTCT ACGCGGTCGC GGCGCTCCTG
CCGAGCCGCC GGGGCGGGGC CTGGCCCTGG ATCCGCGTCC TGGCCTGGGC GGCGGGATGC
GCGGCCGTGG GGGCGGCCCT GGTCGGCCCC CTGGCCGAGC GGGCCCACCA CGACTTCGCC
GCCCACATGG CGGGGCACGT CCTGCTGGGC ATGCTGGGCC CGCTCCTGCT GGTCCTGGCG
GCACCGGCCA CTCTGGCCCT GCGGACCCTG CCGCTGGACG CCGCGCGCAC CCTCTCCCGG
GTTCTGCGGT CGGCGCCCGC CGCGTTCGCG ACCCATCCGG TCGTCGCGGG CCTGCTCAGC
GTCGGAGGCC TGTGGGCGCT GTACCGCACC GGCCTGTACG CCGCGACGCA CACCGACCCG
CTCCTGCACG CCCTGGTACA CGCCCACGTG CTGGCCGCCG GATGCCTGTT CACCTTCGCG
GTGCTGGGCG GACCCGACCC CGCGCCGCAC CGGCTCCCTC CGCCGTGGCG GGCCGCCGCC
CTGGTCGCGG CCGTCGCCGC GCACAACGTC CTGGCCAAGT CCCTCTACGC GGTGCCGCCT
CCGGGGGTGC CCGCCGAACA GGCCCATGCC GGAGCCCAGC TCATGTACTA CGCCGGTGCG
CCGGTGGAGA TCGCGTTGAT CTTCCTGGTG TGCCGTCCCT GGCTGCTTCC CCGGCCGCGT
CCGGAAGCCG GGCGGGGCCG CCTCAGGACT CCCGCGGGGG AGGAGCGACT TCGTCGGGGG
TGGGTCGTCC GCCGTCGGTC TGCTGGCCCC GGATGA
 
Protein sequence
MDHRGHEPAT AVPGLLAPGA WAVLALVCAA LAVYAVAALL PSRRGGAWPW IRVLAWAAGC 
AAVGAALVGP LAERAHHDFA AHMAGHVLLG MLGPLLLVLA APATLALRTL PLDAARTLSR
VLRSAPAAFA THPVVAGLLS VGGLWALYRT GLYAATHTDP LLHALVHAHV LAAGCLFTFA
VLGGPDPAPH RLPPPWRAAA LVAAVAAHNV LAKSLYAVPP PGVPAEQAHA GAQLMYYAGA
PVEIALIFLV CRPWLLPRPR PEAGRGRLRT PAGEERLRRG WVVRRRSAGP G