| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3534 |
|---|
| Symbol | |
|---|
| ID | 9247403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4244560 |
|---|
| End bp | 4245378 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | 2,5-didehydrogluconate reductase |
|---|
| Protein accession | YP_003681441 |
|---|
| Protein GI | 297562467 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.946669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.675115 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACG TCACGCTGAA CAACGGCCTC ACCATGCCCC AACTCGGGTT CGGCGTCTGG
CAGGTTCCCG ACGACGAGGC CCGGGCCGCG GTCGCGACCG CCCTGGAGAC CGGGTACCGC
AGCATCGACA CCGCCAGGGT CTACGACAAC GAGCGGGGCA CGGGCCGGGC CCTGGCCGAG
TCGGGCATCG CCCGCGAGGA GCTGTTCGTC ACCACCAAGC TGTGGAACGA CGAGCAGGGC
TACGACAGCA CCCTCAAGGC CTTCGACGCC AGCCTGGACC GCCTCGGCCT GGACTACGTG
GACCTGTACC TGATCCACTG GCCCTGCCCC GGGCAGGACG CCTACGTCGA GAGCTGGAAG
GCGATGGAGC GCATCCACGC CGAGGGCCGC GCCAGGTCCA TCGGCGTGTC CAACTTCACC
GAGCAGACCC TGGACCGCCT GGTCGCGGAG ACCGACGTCG TCCCGGTCCT CAACCAGATC
GAGCTGCACC CCTACTTCTC GCAGGGGGCC ATGCGGGCCG TCAACGCCCG CCACGGCCTC
CTCACCGAGG CCTGGAGCCC GCTGGGCCAG GGCAAGGGGC TGCTGGAGGA CCCGGAGCTG
ACCGCCCTCG GCGAGAAGCA CGGCAGGTCG GCGGCGCAGG TCGTGCTGCG CTGGCACCTC
CAGCTCGGCA ACGTCGTGAT CCCCAAGTCG GTGACCCCGT CCCGGATCCG CGAGAACTTC
GACGTGTTCG GCTTCGAGCT GTCCGCCGAG GACATGGACC GGGTCTCGGC CCTCGACCGG
GGCGGCCGGA TCGGCTCGGA CCCCGCCACG GTCGGCTGA
|
|---|
| Protein sequence | MQHVTLNNGL TMPQLGFGVW QVPDDEARAA VATALETGYR SIDTARVYDN ERGTGRALAE
SGIAREELFV TTKLWNDEQG YDSTLKAFDA SLDRLGLDYV DLYLIHWPCP GQDAYVESWK
AMERIHAEGR ARSIGVSNFT EQTLDRLVAE TDVVPVLNQI ELHPYFSQGA MRAVNARHGL
LTEAWSPLGQ GKGLLEDPEL TALGEKHGRS AAQVVLRWHL QLGNVVIPKS VTPSRIRENF
DVFGFELSAE DMDRVSALDR GGRIGSDPAT VG
|
|---|
| |