| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3532 |
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| Symbol | |
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| ID | 9247401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 4241239 |
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| End bp | 4242909 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003681439 |
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| Protein GI | 297562465 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.825969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAAA AGCTGGCGCA AAGACTGGGG CTCGAGACGA ACCCGGCGAT CTTCTTCGTG
TCCGCCGCGT TGACCATCGT TTTCGTGGTG TCCGCGATCT TCTTCACCGA CACGGTGGAC
GCCGTCTTCG GAACCACCTC CGGCTGGATC CTCACCAACC TGGGATGGTT CTACATCCTC
GGTGTGACCA CCTTCCTCAT CTTCCTGGTC TGGATCGCGT TCAGCAGGTT CGGGCGGGTA
CGACTGGGGC CGCCGGAGAG CACGCCCGAC TACAGCAACT CCGCCTGGTT CGCCATGCTG
TTCGCCGCCG GCATCGGCAG CATCCTGATG TTCTGGGGAG TGGCCGAACC CATCAGCCAC
TACGCCGAGC CGCCGCGCTC CGACGTCGGC CCGCAGACCA TCGAGGCGGC CGAGGAGGCG
ATGGGCTTCA CGCTCTACCA CTTCGGCCTG CACACCTGGA CGATCTTCTG TCTGCCCGGG
CTCGCCTTCG CCTACTTCGT GTACCGCAAG GGCCTGCCCT TCCGGGTCAG CTCCGTCTTC
CAGCCCTTCC TCGGGGACCG GATCAACGGC CCCATCGGGC GGACCATCGA CATCGTCGCG
GTCCTGGGCA CCCTGTTCGG CGTCGCCGTC ACCATCGGCC TGGGCACCCT CCAGATGAAC
AGCGGCCTCA ACACCCTGTT CGGCCTGGAG GAGAGCCGCG TCAGCCAACT GATCCTCATC
GCGATCGTCA CCACCGTCGC CGTGATCTCC GTGGCCACCG GCCTCGACGT CGGCATCAAG
TGGCTGTCCA CGATCAACAT CTACATGGCC GTGGGGCTGC TGGTCTTCGT CTTCCTCGCC
GGCTCGACGC TCTACCTGGC CAAGGGGGTC ATCGAGACCA CCGGCGTCTA CCTGGAGATG
CTGGTCCCGC TGTCGTTCTG GAACGACACC TTCGCCAACA CCGGCTGGCA GGGCTCCTGG
ACCGTCTTCT ACTGGGCGTG GACCATCACC TGGTCGCCCT TCGTCGGCAT CTTCATCGCG
CGCATCTCCA AGGGCCGGAC CATCCGGGAG TTCATCCTCG GCGTGCTGGC CGCGCCCACC
GCGTTCAGCG TCGTGTGGTT CAGCGTGTTC GGCCTGTCGG CCTTCGACAT CGAGCGCAAC
CAGGGCGGCG GCCTGGTGGA CGAGGTGGTC ACGCAGGAGG ACATCCCCGG TTCCCTGTTC
GCCTTCCTGG AGCACTTCCC GCTGACCACG GTCGTGTCGG TGGTGGCCAT CCTCATCGTC
ATCATCTTCT TCACCACGTC CTCGGACTCG GCCTCCCTGG TGGTGGACAT GCTCTGCTCC
GGCAAGAGCG ACAACCCCAC CCGGCAGCGG GTGTTCTGGG GGATCACCGA GGGCGTCGTC
GCCGCGACCG TGCTCACCGC CTCCGGCGTG GGCGGCCTGG ACGCCCTGCA ACAGACGATC
ATCGTGTTCG GGCTGCCCTT CTTCGTGATC GGCTTCTTCA TGATGGTGGG GCTGGTGCGC
TCGCTGCACG CCGAGTTCGC GGAGGGGTCG GGCCTTCAGC GCGAACGCAA GGCTCCGCTG
GCCACCAGGG CGCGCAGGAT CCAGCGGCGG TACCGGCGCC TGGGCGAGGC CGGGTCCCGC
GCCGGCGAGC GCAACGGGGG CAACGGCACC GGTGACGGCG GTCCGCGGTA G
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| Protein sequence | MFQKLAQRLG LETNPAIFFV SAALTIVFVV SAIFFTDTVD AVFGTTSGWI LTNLGWFYIL
GVTTFLIFLV WIAFSRFGRV RLGPPESTPD YSNSAWFAML FAAGIGSILM FWGVAEPISH
YAEPPRSDVG PQTIEAAEEA MGFTLYHFGL HTWTIFCLPG LAFAYFVYRK GLPFRVSSVF
QPFLGDRING PIGRTIDIVA VLGTLFGVAV TIGLGTLQMN SGLNTLFGLE ESRVSQLILI
AIVTTVAVIS VATGLDVGIK WLSTINIYMA VGLLVFVFLA GSTLYLAKGV IETTGVYLEM
LVPLSFWNDT FANTGWQGSW TVFYWAWTIT WSPFVGIFIA RISKGRTIRE FILGVLAAPT
AFSVVWFSVF GLSAFDIERN QGGGLVDEVV TQEDIPGSLF AFLEHFPLTT VVSVVAILIV
IIFFTTSSDS ASLVVDMLCS GKSDNPTRQR VFWGITEGVV AATVLTASGV GGLDALQQTI
IVFGLPFFVI GFFMMVGLVR SLHAEFAEGS GLQRERKAPL ATRARRIQRR YRRLGEAGSR
AGERNGGNGT GDGGPR
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