Gene Ndas_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3530 
Symbol 
ID9247399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp4239403 
End bp4240110 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content73% 
IMG OID 
Productregulatory protein TetR 
Protein accessionYP_003681437 
Protein GI297562463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.898869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGACC GGGAGCGGCC GCGGGTCGAC GACGAGGCGC GGGAGACGGC GCCGGACGCG 
CGGGAGGAGG CGCCCCGGGC CACGCGCAGA CGCGGGCGGG AACTGCTGAA CGCCATCCAC 
GAGGCGGTCA TCCTGGAGGC CGCGGACGTC GGTGTCGCCC GCCTGTCCAT GGAGGGGATC 
GCCCGCAGGG CGGGCACGGC CAAGACCTCG CTGTACCGGC GCTGGCCCAC GCCGGGGGAC 
ATCCTGCTGG ACGCGATGTA CCACACCTAC CCGCAGGAGG CCCCCACGCC GGGCGCCGAC 
GACCTGCGCG GGGACCTCGT CAGGGCCCTC ATGCTCCTGC GCGACACCAT GAGCCGGTCC 
CTGGGACAGG CGATGTTCTC CGTGGTCGCC GAGGCCAGGC ACCACCCCGA GCTCTACGAC 
CGGTTCGTGC GGGAGGTCTT CGACTCCCGC GGGGGGCGCT TCACCCGCAC CGTCCTCGAG 
CACTACGCCG ACCACGGCAG GATCGACCCC TCCCGCGTCA CCTCCGTCAC CGACGACATC 
GGTGAGGCCA TGCTCATCAA GTACGCCATG GACCACCAGG GGCCGCCCGA CGGGGAGTAC 
GTGGAGCGGA TCGTGGACGA GGTGATCCTG CCCGTCCTCG GCCTGGACCC GCGCGCTGCC 
TCCCCCGCCG CTCCGGAGGA GGGTCCTTCC GCTCCCTCGG ACGGTTAG
 
Protein sequence
MVDRERPRVD DEARETAPDA REEAPRATRR RGRELLNAIH EAVILEAADV GVARLSMEGI 
ARRAGTAKTS LYRRWPTPGD ILLDAMYHTY PQEAPTPGAD DLRGDLVRAL MLLRDTMSRS 
LGQAMFSVVA EARHHPELYD RFVREVFDSR GGRFTRTVLE HYADHGRIDP SRVTSVTDDI 
GEAMLIKYAM DHQGPPDGEY VERIVDEVIL PVLGLDPRAA SPAAPEEGPS APSDG