Gene Ndas_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3529 
Symbol 
ID9247398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4238110 
End bp4239306 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content72% 
IMG OID 
Productprotein of unknown function DUF418 
Protein accessionYP_003681436 
Protein GI297562462 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.296308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTC CCCCCTCCCC GCCGCCTTCG ACCGGGGGCG TGGCACTCGA CCGGCGCTCC 
CTGGCGCCCG ACCTGGCACG CGGGGTGATG CTGCTGGTCA TCGCCGTCGT GCACGCGCAC
ATCGTCTGGG TGATGGCCAC CGCGGGTCAG AGTCCCGCCT CGGGCGGCCT CCTCGACGCC
GCCTCCACCG CCCTGCTGAT GCTGTTCGCC GAGGCGCGCG GGTACCCCAT GTTCGCGGCG
CTGTTCGGCT ACGGGCTCGC CTGGATCCAC CTGCGCCGCA CCGCCGAGGG GCGCCCGGAG
CCGTGGGTGC GCTCACTGGT GCGCCGACGC GGCCGGTGGA TGGTGCTGAT CGGGCTCCTG
CACACGGTCC TGCTCTTCTT CGGCGACATC GTCGCGGTCT ACGGGCTCAT CGCCCTGATG
TTCGCGGGTC TGCTGCACGC CGGTGACCGG CGCCTGCTCG CCCACGCCCT CACCTGGGCC
TCCCTGGGCT CGCTGTTCTA CGCGGTCATG AACAGCCTCC CGCTCTCCGA CCCCGAGGCG
GGCGGGGTCT TCACCCAGGA CCCGCTGGCC GACATGGTCA CACGCCTGTT CACCTGGCCG
GTCATGACCC CGATGCTCGT GGCGAGTTCG GTGTTCCCCT TCCTCGTCGG AGTCTGGGCG
GCCCGCCGCC GCCTGATGGA ACAGCCCGAG CTCCACCTCG GGCTGCTGCG CCGCGTCGCC
TTCATCGGTA TCCCGGTGGC CGTGGTCGGC GGACTGCCGC AGGCCCTGGT GGCCACCGAG
CTGTGGGTGC CCGAGTTCGT GCTCAAGGCC GGTGTGGGCT GGCTGCACGT TCTGACCGGC
TACGCGGGCG GCTTCGGCTA CGCCGCGCTC ATCGCGCTGG TCGCGGTCCG CCTCGGTGAC
CGCAGAGGGC CCCTCGTGCG GGCCCTGGTC GCCACCGGCC AGCGCTCCAT GACCTGCTAC
CTGTTGCAGT CGGTGGGCTG GATCGTGCTG TTCGCGCCCT ACGCCCTCGA CCTTGGGCCA
CAGCTGTCCG GGACCGCCGC CGTCCTGCTC GGCGTCGCCG TCTGGTTGGC CACCGTGGTC
CTGGCCGACG TCATGCGTCG CGTGGGAGTC CGGGGTCCGG CCGAACGCCT CCTGCGCTGG
GGAACCTACA GAACCGTGCG AGCGGAGCAG CCGGAGGCCG AACCAGTGCG GAGATGA
 
Protein sequence
MSLPPSPPPS TGGVALDRRS LAPDLARGVM LLVIAVVHAH IVWVMATAGQ SPASGGLLDA 
ASTALLMLFA EARGYPMFAA LFGYGLAWIH LRRTAEGRPE PWVRSLVRRR GRWMVLIGLL
HTVLLFFGDI VAVYGLIALM FAGLLHAGDR RLLAHALTWA SLGSLFYAVM NSLPLSDPEA
GGVFTQDPLA DMVTRLFTWP VMTPMLVASS VFPFLVGVWA ARRRLMEQPE LHLGLLRRVA
FIGIPVAVVG GLPQALVATE LWVPEFVLKA GVGWLHVLTG YAGGFGYAAL IALVAVRLGD
RRGPLVRALV ATGQRSMTCY LLQSVGWIVL FAPYALDLGP QLSGTAAVLL GVAVWLATVV
LADVMRRVGV RGPAERLLRW GTYRTVRAEQ PEAEPVRR