Gene Ndas_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3516 
Symbol 
ID9247385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4223291 
End bp4224457 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content76% 
IMG OID 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_003681423 
Protein GI297562449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.370817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGC ACGGGGACGC GCATCCGGCG GCAGCGGTGG CGCGCGCATG GGGCCGGGCC 
GTGACGGGCG CCGCCGCCGG AGCGGTGACC GCGCTGGCCG AGGCCCTCTT CCTCGCGGCG
GCCCTCGTAG CCGCCGTTCC CGCGCTGCCG CTCCTGCTCC GTCCCGCCTC GCGCGCGTCC
CTGCGCCGGG CGCTGGACGG GGCCGCCCGG CCGCTGGTCT CCCTGGAGCG CGGCCGCCTG
TCCGCCCTGT TCGGCGTCGA CATCACCGTG CGCCCCGGGA CGGCCCGACC GCTGGCCTAC
CTCGCGGTGC GCTGCCCGGT GGGGCTCTTC GGCGGGCTGG TGCTGGCCTT CTTCGCCGCC
GGGCTCTACC TGGCGCTGTC ACCGCTGGAG GTGCTCGACG GCAACGACCC CGCGATCGTG
CCGATCGGCT TGGCCCTGAT GTACCTGAGC GCTCAGGGAA CCGTGGGCCT GGTGGGAACG
GAACGCTGGC TGGCCCGGAG GTTCCTCGGC CCCAGCCGCC AGGACCTCAT GGAGGAGCGG
ATCGGGGTCC TGGTCGCGAC CCGCGCGGGA GTGGTCGCCG CCGTGGACGA GGAGCGCCGC
CGGATCGAAC GCGATCTGCA CGACGGCGTC CAGCAGCGCC TGGTACTGCT GGGGATGGCG
CTGGGGCGGG CCCGCCGCGA CCCGGGTTCG GAGCGGGGGC GCGCACTGGT CGAGCAGGCC
TACGAGGAGT CCCGTGACGC CCTGCGCGAC CTGAAGGAGG TCGCCTGGCG GGTCTACCCG
GCCGCGCTCG CCGGGTCGGG GCTGCGGGCC GCGCTGCACG ACCTGGTCGG CCGGTCGAGC
CTGCCGATCG ACCTGGAGTA CGGCCTGGAG GGCGCGTGCC CGCCGACCGT GGAGACGGCG
GCCTACTTCG TGGTCGCCGA GTCGGTGACC AACGCGGTCA AGCACGCGCG CGCCGAACGG
GTCAGCGTGC TGGTCGGCGC GCGGGGCGAG GAGGGAGCGA GGTCCGTGGT GGTGCGGGTA
CGGGACGACG GGGTGGGCGG GGCCGACCCC GCGGGAACGG GGCTGGCCGG TCTGGCCAGC
CGGGTCGAGG CGCTCGACGG TCGGCTGTCG GTGGACAGCC CCACGGGCGG ACCGACCACG
GTCAGGGCGG AGCTGCCGTG CGGGTGA
 
Protein sequence
MTTHGDAHPA AAVARAWGRA VTGAAAGAVT ALAEALFLAA ALVAAVPALP LLLRPASRAS 
LRRALDGAAR PLVSLERGRL SALFGVDITV RPGTARPLAY LAVRCPVGLF GGLVLAFFAA
GLYLALSPLE VLDGNDPAIV PIGLALMYLS AQGTVGLVGT ERWLARRFLG PSRQDLMEER
IGVLVATRAG VVAAVDEERR RIERDLHDGV QQRLVLLGMA LGRARRDPGS ERGRALVEQA
YEESRDALRD LKEVAWRVYP AALAGSGLRA ALHDLVGRSS LPIDLEYGLE GACPPTVETA
AYFVVAESVT NAVKHARAER VSVLVGARGE EGARSVVVRV RDDGVGGADP AGTGLAGLAS
RVEALDGRLS VDSPTGGPTT VRAELPCG