Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3516 |
Symbol | |
ID | 9247385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4223291 |
End bp | 4224457 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_003681423 |
Protein GI | 297562449 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.370817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACGC ACGGGGACGC GCATCCGGCG GCAGCGGTGG CGCGCGCATG GGGCCGGGCC GTGACGGGCG CCGCCGCCGG AGCGGTGACC GCGCTGGCCG AGGCCCTCTT CCTCGCGGCG GCCCTCGTAG CCGCCGTTCC CGCGCTGCCG CTCCTGCTCC GTCCCGCCTC GCGCGCGTCC CTGCGCCGGG CGCTGGACGG GGCCGCCCGG CCGCTGGTCT CCCTGGAGCG CGGCCGCCTG TCCGCCCTGT TCGGCGTCGA CATCACCGTG CGCCCCGGGA CGGCCCGACC GCTGGCCTAC CTCGCGGTGC GCTGCCCGGT GGGGCTCTTC GGCGGGCTGG TGCTGGCCTT CTTCGCCGCC GGGCTCTACC TGGCGCTGTC ACCGCTGGAG GTGCTCGACG GCAACGACCC CGCGATCGTG CCGATCGGCT TGGCCCTGAT GTACCTGAGC GCTCAGGGAA CCGTGGGCCT GGTGGGAACG GAACGCTGGC TGGCCCGGAG GTTCCTCGGC CCCAGCCGCC AGGACCTCAT GGAGGAGCGG ATCGGGGTCC TGGTCGCGAC CCGCGCGGGA GTGGTCGCCG CCGTGGACGA GGAGCGCCGC CGGATCGAAC GCGATCTGCA CGACGGCGTC CAGCAGCGCC TGGTACTGCT GGGGATGGCG CTGGGGCGGG CCCGCCGCGA CCCGGGTTCG GAGCGGGGGC GCGCACTGGT CGAGCAGGCC TACGAGGAGT CCCGTGACGC CCTGCGCGAC CTGAAGGAGG TCGCCTGGCG GGTCTACCCG GCCGCGCTCG CCGGGTCGGG GCTGCGGGCC GCGCTGCACG ACCTGGTCGG CCGGTCGAGC CTGCCGATCG ACCTGGAGTA CGGCCTGGAG GGCGCGTGCC CGCCGACCGT GGAGACGGCG GCCTACTTCG TGGTCGCCGA GTCGGTGACC AACGCGGTCA AGCACGCGCG CGCCGAACGG GTCAGCGTGC TGGTCGGCGC GCGGGGCGAG GAGGGAGCGA GGTCCGTGGT GGTGCGGGTA CGGGACGACG GGGTGGGCGG GGCCGACCCC GCGGGAACGG GGCTGGCCGG TCTGGCCAGC CGGGTCGAGG CGCTCGACGG TCGGCTGTCG GTGGACAGCC CCACGGGCGG ACCGACCACG GTCAGGGCGG AGCTGCCGTG CGGGTGA
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Protein sequence | MTTHGDAHPA AAVARAWGRA VTGAAAGAVT ALAEALFLAA ALVAAVPALP LLLRPASRAS LRRALDGAAR PLVSLERGRL SALFGVDITV RPGTARPLAY LAVRCPVGLF GGLVLAFFAA GLYLALSPLE VLDGNDPAIV PIGLALMYLS AQGTVGLVGT ERWLARRFLG PSRQDLMEER IGVLVATRAG VVAAVDEERR RIERDLHDGV QQRLVLLGMA LGRARRDPGS ERGRALVEQA YEESRDALRD LKEVAWRVYP AALAGSGLRA ALHDLVGRSS LPIDLEYGLE GACPPTVETA AYFVVAESVT NAVKHARAER VSVLVGARGE EGARSVVVRV RDDGVGGADP AGTGLAGLAS RVEALDGRLS VDSPTGGPTT VRAELPCG
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