| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3513 |
|---|
| Symbol | |
|---|
| ID | 9247382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4219453 |
|---|
| End bp | 4220421 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | Helix-turn-helix type 11 domain protein |
|---|
| Protein accession | YP_003681420 |
|---|
| Protein GI | 297562446 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.188923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CGAGTGCGCG GATGCTGCGC CTGCTCTCCC TGCTCCAGAC CGGCAGGGCC
TGGCCCGGCG CGGACCTGGC CGCCGCCCTG GAGGTCAGCC CGCGGTCGCT GCGCCGCGAC
ATCGACCGGC TGCGCGAACT GGGCTACGCG GTGGAGAGCC TCCGCGGTCC CGGAGGCCAC
TACCGGCTGG CCGCTGGCCG CGCGGTGCCG CCCCTGCTCC TGGAGGACGA CGAGGTCGTG
GCCGCCGCCC TGGGCCTGCG GATCGTCGCC GCCGGGCTCG GCGGGGTGGA GGGGGTGGAG
GAGAGCGCGG AGCGGGCCCT GGCCCGGCTC GGCCGGGTAC TGCCCTCGCG CCTGGCCCGC
AGGGCGAAAG CCATGGCCGC GGCGGTCGAA CCGGAGCAGC GGGTGTGGCC GGGCGTGCGG
ACACGGGTCC TCACCGACCT GGGCGAGGCC GTCGCGGACG GGCACTGGGT CCGGATGCTC
CACCGCGGCG GCGACGGCCG CGAGCTGCGC CGCAAGGCGG ACCCGTACCG GCTGGTCCTG
TCCGGACGGC GCTGGTACCT GTTCGCCTGG GACCGCGAGC GCGACGACTG GCGGACCTTC
CGACTCGACC GGATCACCGG GGTCACCCCC ACGAGGGCGC CCTTCACCCG CCGGGAGCTG
CCGGGGGAAC CGCTGGCCGA CCACCTGGAG CGGGGCTTCG GGGCGGGGCG GGCCCGGCAC
ACGGTATCGG TCCTGTTCGA CGCGTCGGCC GGGGAGGTGG CGGCGCGGAT CTCCCGGATC
GACGGCGACC TGGAGGCGGT CGGACCCGAC CGGGCGCGCT ACACCGCCCG CGTGGACTCC
CACGAGTGGC TCGCGGTCGT CCTCGCGCTC ACCGGCCTGC CCTTCACGGT GGAGGGTCCG
CCGGAGTTCG CCCGCCACAC CGCGGCGCTC GCCGACCGGC TCCACCGGTC CGTGGACGCG
ACCGGCTGA
|
|---|
| Protein sequence | MADTSARMLR LLSLLQTGRA WPGADLAAAL EVSPRSLRRD IDRLRELGYA VESLRGPGGH
YRLAAGRAVP PLLLEDDEVV AAALGLRIVA AGLGGVEGVE ESAERALARL GRVLPSRLAR
RAKAMAAAVE PEQRVWPGVR TRVLTDLGEA VADGHWVRML HRGGDGRELR RKADPYRLVL
SGRRWYLFAW DRERDDWRTF RLDRITGVTP TRAPFTRREL PGEPLADHLE RGFGAGRARH
TVSVLFDASA GEVAARISRI DGDLEAVGPD RARYTARVDS HEWLAVVLAL TGLPFTVEGP
PEFARHTAAL ADRLHRSVDA TG
|
|---|
| |