Gene Ndas_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3492 
Symbol 
ID9247361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4184703 
End bp4185398 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content76% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003681399 
Protein GI297562425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.781193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGGAA CACCGTCCGC GCAGACGCCC CGCGCACCCT CGGGGCGGGG CCGCCCGCCC 
ATGACCGAGC GGCGCAGGGA GATCGTGCGC ACGGAGATCG CGCGCGCGGC CGTGCGGCTG
TTCACCGAGA ACGGGGTGTC GGGCACCACG GGCGACGACA TCGCGCACGC GCTCGGCATC
TCCACCAGGA CGCTGTGGCG CTACTTCCCC AGCAAGGAGA GCTGCGTCCG GCCGCTGCTG
ACGACGGGCC TGGAACACAT GGCCGAACGC CTGCGCGCCT GCCCTCCCGG GGTCCCCCTC
CTGGAGTACC TGGAGCGGGA GCGGTTCTTC GACGGCGAGC CGCAGGTCGT GGAGGGGCCC
GTAGCAGACC TCATCCGGAT GACCCGCACC GAACCGGCGC TCATGGCGGT GTGGCTGGAG
GTCCACCACG CCGCCGAGTC CGTCTTCGCC CGGATCATCG CCGACCGCAC CGGCGAGTCC
CCCGACAGCC TGCCCGTCCG CGTCCAGGCG GCCACCCTCA ACTCGGCGCT GCGCCTGGCC
GCCGAGGAGC GGGCGCGCCT GGGGGACGAC GGGCGCGGCC TTCCGCCGGA GGGAGTGGGG
CCGCTGCTGC GCACCGCGCT GACCACCGCG GCCCGCGGCC TGACCGCCTT CGGGCACGGC
GGCGGCGACG AGCGCGGGGA CGCTCCCCCG GACTGA
 
Protein sequence
MPGTPSAQTP RAPSGRGRPP MTERRREIVR TEIARAAVRL FTENGVSGTT GDDIAHALGI 
STRTLWRYFP SKESCVRPLL TTGLEHMAER LRACPPGVPL LEYLERERFF DGEPQVVEGP
VADLIRMTRT EPALMAVWLE VHHAAESVFA RIIADRTGES PDSLPVRVQA ATLNSALRLA
AEERARLGDD GRGLPPEGVG PLLRTALTTA ARGLTAFGHG GGDERGDAPP D