Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3492 |
Symbol | |
ID | 9247361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 4184703 |
End bp | 4185398 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003681399 |
Protein GI | 297562425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.781193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGGAA CACCGTCCGC GCAGACGCCC CGCGCACCCT CGGGGCGGGG CCGCCCGCCC ATGACCGAGC GGCGCAGGGA GATCGTGCGC ACGGAGATCG CGCGCGCGGC CGTGCGGCTG TTCACCGAGA ACGGGGTGTC GGGCACCACG GGCGACGACA TCGCGCACGC GCTCGGCATC TCCACCAGGA CGCTGTGGCG CTACTTCCCC AGCAAGGAGA GCTGCGTCCG GCCGCTGCTG ACGACGGGCC TGGAACACAT GGCCGAACGC CTGCGCGCCT GCCCTCCCGG GGTCCCCCTC CTGGAGTACC TGGAGCGGGA GCGGTTCTTC GACGGCGAGC CGCAGGTCGT GGAGGGGCCC GTAGCAGACC TCATCCGGAT GACCCGCACC GAACCGGCGC TCATGGCGGT GTGGCTGGAG GTCCACCACG CCGCCGAGTC CGTCTTCGCC CGGATCATCG CCGACCGCAC CGGCGAGTCC CCCGACAGCC TGCCCGTCCG CGTCCAGGCG GCCACCCTCA ACTCGGCGCT GCGCCTGGCC GCCGAGGAGC GGGCGCGCCT GGGGGACGAC GGGCGCGGCC TTCCGCCGGA GGGAGTGGGG CCGCTGCTGC GCACCGCGCT GACCACCGCG GCCCGCGGCC TGACCGCCTT CGGGCACGGC GGCGGCGACG AGCGCGGGGA CGCTCCCCCG GACTGA
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Protein sequence | MPGTPSAQTP RAPSGRGRPP MTERRREIVR TEIARAAVRL FTENGVSGTT GDDIAHALGI STRTLWRYFP SKESCVRPLL TTGLEHMAER LRACPPGVPL LEYLERERFF DGEPQVVEGP VADLIRMTRT EPALMAVWLE VHHAAESVFA RIIADRTGES PDSLPVRVQA ATLNSALRLA AEERARLGDD GRGLPPEGVG PLLRTALTTA ARGLTAFGHG GGDERGDAPP D
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