| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3473 |
|---|
| Symbol | |
|---|
| ID | 9247342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 4162521 |
|---|
| End bp | 4163237 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003681380 |
|---|
| Protein GI | 297562406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.745227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA CCGCCGCCGC GGAGGTCACG GGCACCCTGC TCACCGCCAC CAGGCTCCGC
AAGTACTTCG GTTCGACCGC CGCGCTGAAC GGGACGGACT TCAGCATCGA CTCCGGCGAG
GTCGTCGCCG TCATGGGCCC GTCCGGATCC GGCAAGTCCA CGCTGCTGCA CTGCCTGGCG
GGCATCCTCG ACCTCGACGG CGGCACCGTG CACTACGGCG GGCACGAGCT GACGGCCCTG
TCCGACGCCG AGCGCAGCAG GCTCAGACGC AGCGACTTCG GCTTCGTCTT CCAGTTCGGC
CAGCTCGTCC CCGAGCTCAC CTGCGTGGAG AACGTCGCGC TGGCCCTGCG CCTGACCGGC
GTCGCCCGCA GGCGGGCGGA GGCCTGCGCG ACGGAGTGGA TGGCCCGCCT GGAGGTGGAC
GACGTCCGCG ACAAGCGCCC CGGCCAGGTG TCCGGCGGGC AGAGGCAGCG GGTGGCCATC
GCGCGGGCGC TGGTGGCCGA GCCCCGGCTG CTCTTCGCCG ACGAGCCCAC CGCCGCGCTG
GACTCGCTCG ACGGGGAGCG CGCCATGGAG CTGCTCACGG GCGCGGCCCG CGACACCGGG
GCCGCGGTCG TCCTGGTCAC CCACGACGTC CGGGTCGCCG CCTACTCCGA CCGCGAGGTC
GTCTTCCGCG ACGGCCAGGC CCTCGGCGAC GCCACCGGGC CCACGGGGGC GACGTGA
|
|---|
| Protein sequence | MSGTAAAEVT GTLLTATRLR KYFGSTAALN GTDFSIDSGE VVAVMGPSGS GKSTLLHCLA
GILDLDGGTV HYGGHELTAL SDAERSRLRR SDFGFVFQFG QLVPELTCVE NVALALRLTG
VARRRAEACA TEWMARLEVD DVRDKRPGQV SGGQRQRVAI ARALVAEPRL LFADEPTAAL
DSLDGERAME LLTGAARDTG AAVVLVTHDV RVAAYSDREV VFRDGQALGD ATGPTGAT
|
|---|
| |